Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2749.g05138.02.t

Possible name(s)

PTPN23; RHPN1; RHPN2

Gene model

Phfumi.CG.MTP2014.S2749.g05138

Location

S2749 [998 / 11,026]

Sequences

Amino acid sequence

Length: 519

>Phfumi.CG.MTP2014.S2749.g05138.02.p
RYDCITGVPAVQRSVSLEKASILFNVGALYTQLGTRADRTRRKGINIAIDAFQSSAGAFD
YVRSNFVNAPTTDLSTSFLQSLTLLMLAQAQECVLERKVLGGFEIQLGKCASISQEAMKV
SEKYSAADKAFGLSEVKAYIPYSWINMVQVKRHHYRALAHYYAGLGLLEQHEAAEPLEIS
KLLSNLYLIEKYSEDHPKHDDVAQRKEDRKRLGKSHLRQAVFYHERALQTHSLCKMMRTV
DILKEYLQHAHNRSVLKFAEVDTEEDFFEIIGAPDIQPYTEYDTDMIAPAFSSVPSSDIF
HRLGPISVFSASNRLGPIRSVKLSTREEKCSFTLQGEGPVIVSNLDDVAMQLGIRNNDVL
VSVDDVDAKWSDHDQIANEIAEKPSIELKLISVIGSFAPARFGEGESMQPNPNSNQNNNN
SANGSVVRRRQLPTKSRDIKKRHSFGIFTGLRLKAKANGASRFSTISENPAGIEEVGPGG
RRPKHPVSVQRSATSAKYVHGQGTVLRPKKDPYSYRSQC

Nucleotide sequence

Length: 1,560

>Phfumi.CG.MTP2014.S2749.g05138.02.t
AGGTATGATTGCATTACTGGTGTTCCAGCCGTTCAGCGCTCAGTGTCCTTGGAAAAAGCT
AGTATCCTGTTCAACGTGGGCGCGTTATACACACAACTTGGCACGAGGGCAGACCGCACC
CGGCGCAAAGGCATCAATATTGCAATAGACGCCTTTCAAAGTTCCGCAGGCGCATTCGAC
TATGTACGTTCCAACTTCGTGAATGCCCCCACAACTGACCTGAGCACCTCGTTTCTGCAA
TCCCTCACACTGCTGATGCTGGCACAAGCACAAGAGTGTGTTCTTGAACGGAAGGTGCTT
GGCGGATTCGAGATCCAACTTGGAAAATGTGCTTCCATCTCACAAGAGGCTATGAAGGTA
TCGGAAAAATACAGTGCAGCCGACAAGGCTTTCGGATTGAGTGAAGTGAAAGCTTATATC
CCATACTCGTGGATAAACATGGTCCAAGTGAAACGTCATCACTACAGAGCTCTTGCACAT
TACTATGCTGGACTGGGACTTCTTGAGCAACACGAGGCTGCCGAGCCCCTGGAGATCTCT
AAACTACTTTCCAATCTTTACTTGATCGAGAAATATAGCGAGGATCATCCGAAACACGAT
GATGTAGCGCAGAGGAAGGAAGATCGAAAAAGACTTGGAAAATCTCACCTCCGTCAAGCC
GTGTTCTACCACGAACGAGCTCTACAGACACATAGCTTGTGCAAGATGATGCGGACTGTC
GACATTCTCAAGGAATACTTGCAACACGCACACAACCGATCTGTGTTGAAATTTGCTGAA
GTTGACACGGAGGAAGATTTCTTTGAGATCATTGGAGCACCCGATATACAACCTTACACA
GAATACGACACAGACATGATTGCACCGGCATTTTCCAGCGTTCCCTCTTCTGATATTTTC
CATCGCTTGGGCCCGATTTCTGTGTTTTCCGCAAGCAACCGGTTGGGTCCAATACGTTCT
GTGAAGCTTTCCACACGAGAAGAAAAATGTTCATTCACATTACAAGGGGAGGGACCAGTC
ATAGTGAGCAACCTCGACGATGTCGCAATGCAATTAGGCATACGTAACAATGACGTGTTG
GTGTCGGTTGATGACGTGGACGCTAAATGGAGCGACCACGACCAAATTGCGAATGAGATT
GCTGAGAAACCGAGCATTGAACTGAAGTTGATCTCGGTCATCGGAAGTTTCGCTCCTGCA
CGGTTCGGTGAAGGTGAATCGATGCAACCGAATCCGAATAGCAACCAGAACAACAATAAT
TCCGCGAACGGATCTGTTGTGCGCCGACGCCAGCTCCCCACCAAGTCACGTGACATCAAG
AAACGTCATTCGTTCGGAATCTTCACAGGTCTTCGCTTGAAGGCGAAGGCCAACGGCGCA
AGTCGCTTCTCGACGATTTCTGAAAATCCTGCGGGAATCGAGGAGGTCGGACCCGGCGGA
CGAAGGCCCAAGCACCCGGTGTCTGTGCAGAGGAGCGCCACGTCTGCTAAGTACGTTCAC
GGACAGGGCACTGTGCTCAGGCCGAAAAAGGATCCATACAGTTACCGCTCCCAATGCTGA

InterProScan

Gene3D	BRO1_sf (IPR038499) - T[1-253] 4.6E-52
SMART	BRO1_dom (IPR004328) - T[1-318] 8.0E-54
ProSiteProfiles	BRO1_dom (IPR004328) - T[1-306] 31.357
Pfam	BRO1_dom (IPR004328) - T[2-314] 5.0E-57
SUPERFAMILY	PDZ_sf (IPR036034) - T[302-388] 3.24E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RHPN2_HUMAN	40.64 %	295	4.81E-92
RHPN1_HUMAN	35.377 %	263	7.01E-80
RHN2P_HUMAN	36.364 %	239	4.55E-72