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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.392.v1....' > 
  2. Clone 'cima017c09' > 
  3. Clone 'AHC0AAA267YJ02' > 
  4. Transcript 'KH2012:KH.S910.6.v1....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2749.g05138.02.t

Possible name(s)

PTPN23; RHPN1; RHPN2

Gene model

Phfumi.CG.MTP2014.S2749.g05138

Location

S2749 [998 / 11,026]

Sequences

Amino acid sequence

Length: 519

>Phfumi.CG.MTP2014.S2749.g05138.02.p
RYDCITGVPAVQRSVSLEKASILFNVGALYTQLGTRADRTRRKGINIAIDAFQSSAGAFD
YVRSNFVNAPTTDLSTSFLQSLTLLMLAQAQECVLERKVLGGFEIQLGKCASISQEAMKV
SEKYSAADKAFGLSEVKAYIPYSWINMVQVKRHHYRALAHYYAGLGLLEQHEAAEPLEIS
KLLSNLYLIEKYSEDHPKHDDVAQRKEDRKRLGKSHLRQAVFYHERALQTHSLCKMMRTV
DILKEYLQHAHNRSVLKFAEVDTEEDFFEIIGAPDIQPYTEYDTDMIAPAFSSVPSSDIF
HRLGPISVFSASNRLGPIRSVKLSTREEKCSFTLQGEGPVIVSNLDDVAMQLGIRNNDVL
VSVDDVDAKWSDHDQIANEIAEKPSIELKLISVIGSFAPARFGEGESMQPNPNSNQNNNN
SANGSVVRRRQLPTKSRDIKKRHSFGIFTGLRLKAKANGASRFSTISENPAGIEEVGPGG
RRPKHPVSVQRSATSAKYVHGQGTVLRPKKDPYSYRSQC

Nucleotide sequence

Length: 1,560

>Phfumi.CG.MTP2014.S2749.g05138.02.t
AGGTATGATTGCATTACTGGTGTTCCAGCCGTTCAGCGCTCAGTGTCCTTGGAAAAAGCT
AGTATCCTGTTCAACGTGGGCGCGTTATACACACAACTTGGCACGAGGGCAGACCGCACC
CGGCGCAAAGGCATCAATATTGCAATAGACGCCTTTCAAAGTTCCGCAGGCGCATTCGAC
TATGTACGTTCCAACTTCGTGAATGCCCCCACAACTGACCTGAGCACCTCGTTTCTGCAA
TCCCTCACACTGCTGATGCTGGCACAAGCACAAGAGTGTGTTCTTGAACGGAAGGTGCTT
GGCGGATTCGAGATCCAACTTGGAAAATGTGCTTCCATCTCACAAGAGGCTATGAAGGTA
TCGGAAAAATACAGTGCAGCCGACAAGGCTTTCGGATTGAGTGAAGTGAAAGCTTATATC
CCATACTCGTGGATAAACATGGTCCAAGTGAAACGTCATCACTACAGAGCTCTTGCACAT
TACTATGCTGGACTGGGACTTCTTGAGCAACACGAGGCTGCCGAGCCCCTGGAGATCTCT
AAACTACTTTCCAATCTTTACTTGATCGAGAAATATAGCGAGGATCATCCGAAACACGAT
GATGTAGCGCAGAGGAAGGAAGATCGAAAAAGACTTGGAAAATCTCACCTCCGTCAAGCC
GTGTTCTACCACGAACGAGCTCTACAGACACATAGCTTGTGCAAGATGATGCGGACTGTC
GACATTCTCAAGGAATACTTGCAACACGCACACAACCGATCTGTGTTGAAATTTGCTGAA
GTTGACACGGAGGAAGATTTCTTTGAGATCATTGGAGCACCCGATATACAACCTTACACA
GAATACGACACAGACATGATTGCACCGGCATTTTCCAGCGTTCCCTCTTCTGATATTTTC
CATCGCTTGGGCCCGATTTCTGTGTTTTCCGCAAGCAACCGGTTGGGTCCAATACGTTCT
GTGAAGCTTTCCACACGAGAAGAAAAATGTTCATTCACATTACAAGGGGAGGGACCAGTC
ATAGTGAGCAACCTCGACGATGTCGCAATGCAATTAGGCATACGTAACAATGACGTGTTG
GTGTCGGTTGATGACGTGGACGCTAAATGGAGCGACCACGACCAAATTGCGAATGAGATT
GCTGAGAAACCGAGCATTGAACTGAAGTTGATCTCGGTCATCGGAAGTTTCGCTCCTGCA
CGGTTCGGTGAAGGTGAATCGATGCAACCGAATCCGAATAGCAACCAGAACAACAATAAT
TCCGCGAACGGATCTGTTGTGCGCCGACGCCAGCTCCCCACCAAGTCACGTGACATCAAG
AAACGTCATTCGTTCGGAATCTTCACAGGTCTTCGCTTGAAGGCGAAGGCCAACGGCGCA
AGTCGCTTCTCGACGATTTCTGAAAATCCTGCGGGAATCGAGGAGGTCGGACCCGGCGGA
CGAAGGCCCAAGCACCCGGTGTCTGTGCAGAGGAGCGCCACGTCTGCTAAGTACGTTCAC
GGACAGGGCACTGTGCTCAGGCCGAAAAAGGATCCATACAGTTACCGCTCCCAATGCTGA

InterProScan

Gene3D
BRO1_sf (IPR038499) - T[1-253] 4.6E-52
SMART
BRO1_dom (IPR004328) - T[1-318] 8.0E-54
ProSiteProfiles
BRO1_dom (IPR004328) - T[1-306] 31.357
Pfam
BRO1_dom (IPR004328) - T[2-314] 5.0E-57
SUPERFAMILY
PDZ_sf (IPR036034) - T[302-388] 3.24E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHPN2_HUMAN 40.64 % 295 4.81E-92
RHPN1_HUMAN 35.377 % 263 7.01E-80
RHN2P_HUMAN 36.364 % 239 4.55E-72