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- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2705.g05103.02.t
Possible name(s)
GPSM1; TTC28
Gene model
Location
S2705 [6,705 / 10,466]
Amino acid sequence
Length: 1,206
>Phfumi.CG.MTP2014.S2705.g05103.02.p
MHGKKLKSLCHLNGKEKDTLETVPVIGELGQIQNHLGNVLNKFQNIDELKNLNKIAWIRS
AVLLNAALARKPQNSKEILNQLHHLCTHVLQEAGAENSEANLVEKAMSCKVTLTGLRQRV
ENFLKKNFTAHGNEEQKLQFTKHMEDLQQGISEQYSTLMKEIMDYCVDIKGTPPCKYALL
GMGSLAKQEITPYSDFESVIILEDGVHLWSNYEEILEYFRWVAMLFQVVLVNMGETIIRF
MAIPGLNSQENKAGNWFYDAHTPCGISPDGFAADACKNPLGRQEVTQSKPNKLELIKTTK
EMLELLDQKICDKTYDSRLADMLRKTCFVSGNKHLYDFYQLGVKKSVNQEEQNEAQKTFQ
ESVQHMQDNLLEFNSMYSLLKQEQSSKVDIKRFVYRSLTLLISALGRHYNTEANSSFAIV
RELVEQNIIPAEYMDETLLGIAIICKIRHLAYSPAKEQKDVLSTIDESEGYAWCMENTDR
QRVDKKIKELVHEEEVDSFFITSIRLQSFMAQRFKLVIAKKSMLNRQFPQLHTLSKKKLQ
CITNYFLGRHERVIEFCNKVLEQEETGYSSSHDNEESIQASFNSLLAGSYLFLHKFERSI
YHSQLALASRHMQSNKEEMLVVIGMASLCYVLLHKPTEALNYAKQGLSILENHTLHDFEE
HFTAKMEFMMYHLLFGCNYHLENYEETDKYLNLAKQKLLEIGGTQIGHKDLEFVSGQLLG
QTGDLEGARTMFLQVLNQSKQLSDNETTDPDVGNTYFAAGLTAKLLGKHTEASENLEKSH
AILKSTKNPRFNKQTAYIESAQGVFELIKYGDDTADNLKNVKTLLELFEKIDNAMEVFTQ
PSDNVYDATWPKSLDDLAKQWNKFPNILQNFGIAPGVVANNKQGVMQNIPEIMLNSGKSR
KKHIAAMADFKLALTMCDFINIGPKFKVKADCLKGIGDALCTFKMYDAAIQHYKQELKIR
EQSIQDKGPNSEIASCYHRIGSCYKQLSNHTEALKCFKTATNLRKKHAEVLPWQHDANRN
MVMGKTLFDEKNFERALQYFENELKARQNISLNSKEKNAENETDCLFMIALCHCHMGKAE
IALNLLHKVNAVLERKGDVRSCQKRAECLEWIGNVHLEMNETDKALESFQTELTLYQHIT
NDMQRDANIAACYFKIGKCYLQCFYNEEAATNFKLAQVFWEANGSPEWQNKIEECKTWVE
YCQQNL
Nucleotide sequence
Length: 3,618
>Phfumi.CG.MTP2014.S2705.g05103.02.t
ATGCATGGAAAAAAATTAAAATCTTTGTGTCATTTAAATGGAAAGGAGAAAGACACACTC
GAGACTGTGCCAGTTATCGGGGAACTTGGTCAGATACAGAACCATTTGGGAAATGTATTA
AATAAATTTCAAAATATTGATGAATTGAAAAACCTAAATAAGATTGCCTGGATTCGAAGT
GCAGTTTTGCTTAATGCTGCTCTTGCAAGAAAACCACAGAACAGCAAAGAAATACTAAAT
CAGCTTCATCACCTTTGTACTCATGTTCTCCAAGAAGCTGGTGCCGAAAACAGCGAGGCC
AATTTAGTAGAGAAAGCGATGTCGTGCAAAGTAACATTAACTGGCCTTAGGCAGCGTGTT
GAGAACTTCCTAAAAAAGAATTTCACTGCACATGGCAACGAAGAACAAAAATTGCAATTC
ACTAAACACATGGAAGACCTCCAACAAGGCATTTCTGAACAATATTCAACACTGATGAAA
GAAATAATGGACTATTGTGTTGATATTAAGGGTACACCACCGTGCAAGTATGCCCTTCTG
GGAATGGGCTCGCTTGCAAAACAGGAGATCACCCCATATTCTGACTTTGAAAGTGTTATT
ATCCTGGAAGATGGAGTTCACCTGTGGAGCAACTATGAAGAGATACTTGAGTATTTTAGG
TGGGTGGCCATGTTATTTCAGGTTGTGTTGGTTAATATGGGTGAAACTATCATACGGTTT
ATGGCCATACCTGGCCTCAATTCACAAGAAAACAAAGCAGGAAATTGGTTTTATGATGCC
CATACACCATGTGGTATCTCTCCTGATGGCTTTGCTGCAGATGCATGCAAGAATCCACTT
GGCAGACAAGAAGTCACTCAGTCAAAGCCAAATAAGCTAGAGTTGATTAAAACAACAAAG
GAGATGCTTGAACTTTTGGATCAGAAAATATGTGATAAAACGTATGACAGTCGATTGGCT
GACATGCTAAGAAAAACCTGCTTTGTTTCTGGTAATAAGCACCTGTATGATTTTTACCAA
CTTGGAGTAAAAAAAAGTGTAAATCAAGAAGAACAAAATGAGGCTCAAAAAACATTTCAA
GAATCAGTTCAACATATGCAAGACAATCTTTTGGAATTTAATTCTATGTACAGCTTGCTG
AAACAAGAACAATCATCGAAAGTTGACATAAAACGCTTTGTGTACAGAAGTCTCACTCTA
CTTATTTCAGCATTAGGCCGACATTACAACACTGAAGCAAATTCATCTTTTGCAATAGTT
CGGGAACTGGTTGAGCAAAATATAATTCCAGCTGAATACATGGATGAAACCTTACTAGGC
ATTGCTATTATTTGCAAGATTCGACATTTAGCTTATAGTCCTGCAAAGGAGCAAAAAGAT
GTTTTGTCCACTATTGATGAAAGTGAAGGATATGCCTGGTGCATGGAAAATACAGACCGA
CAAAGAGTGGACAAAAAAATAAAGGAACTGGTACATGAAGAAGAAGTAGACAGTTTTTTT
ATTACCTCAATACGACTACAGTCTTTTATGGCACAAAGATTTAAGCTTGTTATCGCTAAA
AAAAGTATGCTGAACCGACAGTTTCCACAACTTCACACATTATCAAAGAAAAAACTTCAG
TGCATCACAAATTATTTTTTAGGCCGACATGAAAGGGTAATTGAATTTTGTAACAAGGTT
CTAGAGCAAGAAGAAACTGGATACTCTTCATCCCATGATAATGAGGAGAGCATTCAGGCA
TCTTTCAACAGTTTGCTGGCAGGTTCTTACCTATTTCTGCACAAGTTTGAAAGGTCAATT
TACCACTCACAACTTGCACTAGCTTCAAGACACATGCAAAGTAACAAGGAAGAAATGCTT
GTTGTCATTGGAATGGCATCACTATGTTATGTGCTACTGCATAAGCCAACTGAAGCATTA
AACTATGCAAAACAAGGACTTTCGATCCTAGAAAACCATACACTACATGACTTTGAAGAA
CATTTCACTGCAAAAATGGAATTCATGATGTACCATCTGCTATTTGGTTGCAATTACCAC
CTTGAAAATTATGAGGAAACTGATAAATATTTGAATCTAGCAAAGCAGAAACTTCTAGAA
ATTGGTGGAACACAAATTGGCCACAAAGATTTGGAATTTGTTTCTGGTCAGTTGCTTGGA
CAAACTGGTGACCTAGAGGGGGCTAGGACTATGTTTTTGCAAGTACTGAACCAAAGCAAA
CAGCTATCAGACAATGAAACAACTGACCCAGATGTTGGCAACACCTATTTCGCAGCTGGC
TTGACTGCAAAACTTTTAGGAAAACACACAGAGGCTTCTGAAAACCTTGAAAAATCTCAT
GCCATATTAAAATCAACTAAAAATCCACGATTTAATAAACAAACTGCTTACATTGAATCA
GCTCAAGGGGTTTTCGAACTAATCAAATATGGAGATGACACAGCAGACAATTTAAAAAAT
GTAAAAACACTTTTGGAATTGTTTGAGAAAATTGACAATGCAATGGAAGTTTTTACACAA
CCAAGCGATAATGTGTATGATGCTACATGGCCCAAAAGTCTGGATGATCTTGCTAAACAA
TGGAATAAATTTCCCAACATTCTTCAAAACTTTGGAATTGCCCCAGGTGTGGTAGCAAAC
AACAAGCAAGGTGTCATGCAAAATATTCCAGAAATCATGTTAAATTCAGGAAAATCAAGG
AAAAAACATATCGCAGCAATGGCTGATTTCAAACTTGCCCTTACTATGTGTGACTTTATA
AACATTGGGCCAAAATTCAAGGTTAAAGCAGATTGTCTAAAAGGCATTGGAGACGCTCTT
TGCACATTTAAAATGTATGATGCAGCAATTCAACATTACAAACAGGAATTGAAAATCAGA
GAACAGTCAATTCAAGACAAAGGCCCTAATAGTGAGATTGCATCTTGCTACCATCGCATT
GGAAGCTGTTACAAACAGCTCAGTAATCATACCGAAGCTTTAAAGTGTTTTAAAACTGCT
ACCAACTTGAGAAAGAAACATGCGGAGGTTTTACCCTGGCAACATGATGCCAATCGAAAC
ATGGTCATGGGCAAAACATTGTTCGATGAAAAGAACTTTGAAAGGGCATTACAGTATTTT
GAAAATGAGTTAAAAGCAAGACAAAACATAAGTTTGAATTCGAAAGAAAAAAATGCAGAA
AATGAAACTGATTGTCTGTTCATGATTGCACTTTGTCATTGCCACATGGGAAAAGCTGAA
ATTGCACTAAATCTTCTCCACAAAGTAAATGCAGTTTTAGAGAGAAAAGGTGATGTTCGC
TCATGTCAAAAAAGAGCTGAGTGTCTGGAATGGATTGGAAATGTTCATCTAGAAATGAAT
GAAACAGACAAAGCACTCGAAAGCTTCCAGACAGAACTGACACTTTATCAACACATAACA
AATGACATGCAAAGAGATGCTAACATCGCTGCTTGTTACTTTAAGATTGGAAAGTGTTAT
TTGCAGTGCTTTTACAATGAAGAAGCAGCAACCAACTTCAAACTGGCACAAGTTTTTTGG
GAAGCAAATGGTAGCCCTGAATGGCAAAACAAGATTGAAGAATGTAAAACATGGGTAGAA
TATTGCCAACAAAATCTG
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[142-234] 7.4E-8 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[541-708] 6.4E-8 - T[709-843] 1.0E-5 - T[895-1053] 6.9E-20 - T[1054-1205] 2.1E-13 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[553-802] 3.17E-9 - T[917-1183] 1.64E-17 |
| SMART |
TPR_repeat (IPR019734) - T[620-653] 210.0 - T[753-786] 73.0 - T[930-963] 2.8 - T[974-1007] 3.8E-4 - T[1017-1050] 96.0 - T[1106-1139] 43.0 - T[1150-1183] 370.0 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[753-786] 5.015 - T[930-963] 7.021 - T[974-1007] 9.588 - T[1017-1050] 7.316 - T[1106-1139] 8.024 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[930-1050] 11.821 - T[1106-1139] 7.711 |
| Protein Name | Identity | Bit Score | e-value |
|---|