Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S26.g00448.02.t

Possible name(s)

CNOT7; CNOT8

Gene model

Phfumi.CG.MTP2014.S26.g00448

Location

S26 [89,190 / 92,275]

Sequences

Amino acid sequence

Length: 286

>Phfumi.CG.MTP2014.S26.g00448.02.p
ILWQNRMPAQQTDDPIIEVWSTNIDAEFKKIRKIVQQYNYIAMDTEFPGVVARPIGEFRT
NSDYQYQLLRCNVDMLKIIQLGLTFMNESGETPAGVSTWQFNFKFNLTEDMYAQDSIELL
QESGIQFKKHEAEGIEPLYFAELLMTSGVVLMDNVHWVSFHSGYDFGYLLKLLTNNNLAT
DESTFFELLKLFFPTIFDVKYLMKSCKALKGGLQEVAEQLEVKRVGPQHQAGSDSLLTGL
TFFKLKEKFFDNESDISKHSGHLYGLGSSYVQNGNPYSAEEYNKNS

Nucleotide sequence

Length: 861

>Phfumi.CG.MTP2014.S26.g00448.02.t
ATTTTGTGGCAAAACAGAATGCCTGCCCAACAAACAGATGATCCTATCATTGAAGTGTGG
TCAACTAACATAGATGCAGAGTTTAAGAAGATCAGAAAAATTGTCCAGCAATACAACTAC
ATTGCTATGGATACTGAGTTTCCTGGAGTGGTGGCTCGGCCTATTGGAGAGTTCCGGACA
AATTCAGACTATCAGTACCAGCTTTTGCGATGCAATGTAGATATGCTAAAAATCATACAA
CTGGGCCTCACTTTTATGAATGAAAGTGGTGAAACACCAGCTGGTGTCTCAACTTGGCAG
TTCAACTTCAAATTTAACTTGACTGAAGACATGTATGCTCAAGACTCTATTGAATTGCTT
CAAGAATCAGGAATTCAATTCAAGAAGCATGAAGCAGAGGGAATAGAACCTCTGTATTTC
GCAGAGCTTCTGATGACATCGGGAGTTGTTTTGATGGATAATGTTCACTGGGTTTCATTT
CACAGCGGCTATGATTTTGGTTATTTACTCAAACTGCTTACAAATAACAACCTTGCAACC
GATGAATCAACATTTTTCGAGTTACTCAAATTGTTTTTTCCTACAATTTTTGACGTCAAG
TATCTGATGAAAAGCTGCAAAGCACTGAAGGGAGGTCTGCAAGAAGTAGCTGAACAGCTT
GAAGTAAAAAGAGTTGGACCACAACATCAGGCTGGCAGTGACAGCCTGCTTACTGGATTA
ACTTTCTTCAAACTAAAAGAAAAATTCTTTGACAATGAGAGTGACATATCCAAACATTCC
GGTCATTTGTATGGATTGGGCAGTTCGTATGTACAAAATGGAAACCCCTACAGTGCTGAG
GAATACAACAAGAATTCCTGA

InterProScan

SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[15-266] 8.86E-93
Gene3D	RNaseH_sf (IPR036397) - T[15-266] 5.2E-119
Pfam	RNase_CAF1 (IPR006941) - T[19-136] 3.2E-11 - T[158-242] 6.0E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	74.126 %	437	1.71E-156
CNOT8_HUMAN	68.266 %	399	1.45E-141