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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S26.g00448.01.t

Possible name(s)

CNOT7; CNOT8

Gene model

Phfumi.CG.MTP2014.S26.g00448

Location

S26 [89,190 / 92,257]

Sequences

Amino acid sequence

Length: 280

>Phfumi.CG.MTP2014.S26.g00448.01.p
MPAQQTDDPIIEVWSTNIDAEFKKIRKIVQQYNYIAMDTEFPGVVARPIGEFRTNSDYQY
QLLRCNVDMLKIIQLGLTFMNESGETPAGVSTWQFNFKFNLTEDMYAQDSIELLQESGIQ
FKKHEAEGIEPLYFAELLMTSGVVLMDNVHWVSFHSGYDFGYLLKLLTNNNLATDESTFF
ELLKLFFPTIFDVKYLMKSCKALKGGLQEVAEQLEVKRVGPQHQAGSDSLLTGLTFFKLK
EKFFDNESDISKHSGHLYGLGSSYVQNGNPYSAEEYNKNS

Nucleotide sequence

Length: 843

>Phfumi.CG.MTP2014.S26.g00448.01.t
ATGCCTGCCCAACAAACAGATGATCCTATCATTGAAGTGTGGTCAACTAACATAGATGCA
GAGTTTAAGAAGATCAGAAAAATTGTCCAGCAATACAACTACATTGCTATGGATACTGAG
TTTCCTGGAGTGGTGGCTCGGCCTATTGGAGAGTTCCGGACAAATTCAGACTATCAGTAC
CAGCTTTTGCGATGCAATGTAGATATGCTAAAAATCATACAACTGGGCCTCACTTTTATG
AATGAAAGTGGTGAAACACCAGCTGGTGTCTCAACTTGGCAGTTCAACTTCAAATTTAAC
TTGACTGAAGACATGTATGCTCAAGACTCTATTGAATTGCTTCAAGAATCAGGAATTCAA
TTCAAGAAGCATGAAGCAGAGGGAATAGAACCTCTGTATTTCGCAGAGCTTCTGATGACA
TCGGGAGTTGTTTTGATGGATAATGTTCACTGGGTTTCATTTCACAGCGGCTATGATTTT
GGTTATTTACTCAAACTGCTTACAAATAACAACCTTGCAACCGATGAATCAACATTTTTC
GAGTTACTCAAATTGTTTTTTCCTACAATTTTTGACGTCAAGTATCTGATGAAAAGCTGC
AAAGCACTGAAGGGAGGTCTGCAAGAAGTAGCTGAACAGCTTGAAGTAAAAAGAGTTGGA
CCACAACATCAGGCTGGCAGTGACAGCCTGCTTACTGGATTAACTTTCTTCAAACTAAAA
GAAAAATTCTTTGACAATGAGAGTGACATATCCAAACATTCCGGTCATTTGTATGGATTG
GGCAGTTCGTATGTACAAAATGGAAACCCCTACAGTGCTGAGGAATACAACAAGAATTCC
TGA

InterProScan

Gene3D
RNaseH_sf (IPR036397) - T[9-260] 4.8E-119
SUPERFAMILY
RNaseH-like_sf (IPR012337) - T[9-260] 8.22E-93
Pfam
RNase_CAF1 (IPR006941) - T[13-130] 3.0E-11 - T[152-236] 6.1E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT7_HUMAN 74.126 % 437 9.85E-157
CNOT8_HUMAN 68.266 % 400 1.03E-141