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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S46...' > 
  3. Transcript 'Cisavi.CG.ENS81.R41....' > 
  4. Transcript 'KH2012:KH.C5.108.v1....' > 
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2692.g05094.02.t

Possible name(s)

SNF8

Gene model

Phfumi.CG.MTP2014.S2692.g05094

Location

S2692 [7,788 / 10,106]

Sequences

Amino acid sequence

Length: 230

>Phfumi.CG.MTP2014.S2692.g05094.02.p
MRRRGVGASAVTKKKLESARYKERGTELAAQQLEQLSNQLKTFHTNLEEFAAKHKNVDPL
ASGKGFWSEMLGVGDFYYELGVQAVEICIATRTQNGGILTMDELHQRLMKTRGRYGQDIT
QEDIRTAIKKLKVLGTGFALLGSANKQIIQSVPGELNMDHTSILDLAQQNNGKVSSQQVQ
SALSWSPERTQQVLEHLTREGMAWVDDQSKEKQRLYWFPALFNSDRKLGS

Nucleotide sequence

Length: 693

>Phfumi.CG.MTP2014.S2692.g05094.02.t
ATGAGGCGACGAGGTGTTGGAGCAAGTGCGGTTACAAAAAAGAAGCTAGAGAGTGCAAGA
TACAAAGAGCGTGGCACGGAACTGGCCGCTCAACAATTGGAACAATTAAGCAATCAACTT
AAAACGTTTCACACCAATTTAGAAGAGTTTGCCGCTAAGCATAAGAATGTTGACCCATTG
GCATCTGGAAAGGGATTTTGGTCAGAAATGCTTGGTGTTGGAGATTTTTATTACGAACTT
GGTGTTCAGGCAGTTGAAATTTGTATAGCAACCCGAACACAAAATGGAGGAATCTTGACA
ATGGATGAACTGCACCAAAGGCTTATGAAAACACGAGGGCGATATGGACAAGATATTACA
CAAGAAGACATCAGGACGGCCATTAAAAAATTAAAAGTACTTGGAACAGGTTTCGCCTTA
CTTGGATCAGCTAATAAACAAATCATTCAATCAGTACCTGGAGAACTCAACATGGACCAC
ACATCCATTTTAGACCTTGCCCAACAAAACAATGGTAAAGTTTCCTCCCAACAAGTTCAG
TCGGCTCTCTCGTGGTCGCCAGAGCGCACTCAACAAGTTTTAGAGCACTTGACACGAGAA
GGCATGGCGTGGGTGGACGACCAATCGAAAGAAAAACAGAGATTGTATTGGTTTCCTGCA
CTTTTTAATTCCGATCGGAAGCTTGGATCTTGA

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[1-56] 5.4E-81 - T[57-224] 5.4E-81
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[25-155] 7.98E-35 - T[156-222] 9.33E-16
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[72-152] 2.0E-30 - T[153-228] 1.5E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 55.144 % 279 1.63E-95