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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L153.22.v3...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S7...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S9...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2692.g05094.01.t

Possible name(s)

SNF8

Gene model

Phfumi.CG.MTP2014.S2692.g05094

Location

S2692 [7,788 / 9,193]

Sequences

Amino acid sequence

Length: 190

>Phfumi.CG.MTP2014.S2692.g05094.01.p
MRRRGVGASAVTKKKLESARYKERGTELAAQQLEQLSNQLKTFHTNLEEFAAKHKNEIRK
DPQFRHQFQQMCASIGVDPLASGKGFWSEMLGVGDFYYELGVQAVEICIATRTQNGGILT
MDELHQRLMKTRGRYGQDITQEDIRTAIKKLKVLGTGFALLGSANKQIIQSVPGELNMDH
TSILDLAQQV

Nucleotide sequence

Length: 570

>Phfumi.CG.MTP2014.S2692.g05094.01.t
ATGAGGCGACGAGGTGTTGGAGCAAGTGCGGTTACAAAAAAGAAGCTAGAGAGTGCAAGA
TACAAAGAGCGTGGCACGGAACTGGCCGCTCAACAATTGGAACAATTAAGCAATCAACTT
AAAACGTTTCACACCAATTTAGAAGAGTTTGCCGCTAAGCATAAGAATGAAATCAGGAAA
GATCCACAGTTCAGACACCAGTTTCAACAAATGTGTGCATCCATAGGAGTTGACCCATTG
GCATCTGGAAAGGGATTTTGGTCAGAAATGCTTGGTGTTGGAGATTTTTATTACGAACTT
GGTGTTCAGGCAGTTGAAATTTGTATAGCAACCCGAACACAAAATGGAGGAATCTTGACA
ATGGATGAACTGCACCAAAGGCTTATGAAAACACGAGGGCGATATGGACAAGATATTACA
CAAGAAGACATCAGGACGGCCATTAAAAAATTAAAAGTACTTGGAACAGGTTTCGCCTTA
CTTGGATCAGCTAATAAACAAATCATTCAATCAGTACCTGGAGAACTCAACATGGACCAC
ACATCCATTTTAGACCTTGCCCAACAAGTA

InterProScan

PANTHER
ESCRT-2_cplx_Snf8 (IPR016689) - T[1-189] 4.5E-81
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[25-175] 3.08E-51
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[92-172] 1.3E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNF8_HUMAN 65.608 % 274 2.94E-94