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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.316.v1....'
  2. Transcript 'Haaura.CG.MTP2014.S2...'
  3. Transcript 'Phmamm.CG.MTP2014.S3...'
  4. Clone 'AHC0AAA149YJ04'
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S26883.g09957.01.t

Possible name(s)

CSMD1; CSMD3; CUBN

Location

S26883 [26 / 1,014]

Sequences

Amino acid sequence

Length: 254

>Phfumi.CG.MTP2014.S26883.g09957.01.p
NFGDIADNVRFQTFLPDYAEMTSFTMHTDGVAYIGRKTGHKEAEAVLEKARQGNHVAAMH
SPERLRDVSDMQLQTAKNTVHIKSNKEITFNIEYKETVQDMIDSGVKVQNRAQVVFDLFG
STVQDLVGEIFSPNYPYPYPTSADIAWLVRVPDDNVVQLYIVDIDIEECCDRLTIYDGNS
FHGPVIAILSGTLANQNNLTMYQSTGSSMSLHLTSDCSESKTGFRAITSVAVIGPTTEKP
PVGETTPGVIIDTT

Nucleotide sequence

Length: 762

>Phfumi.CG.MTP2014.S26883.g09957.01.t
AACTTCGGCGACATAGCTGATAACGTTAGATTCCAAACCTTCCTCCCGGATTACGCAGAG
ATGACGTCATTCACAATGCATACAGACGGAGTAGCGTACATAGGACGAAAAACCGGCCAC
AAGGAGGCGGAAGCGGTGCTCGAAAAAGCAAGACAGGGCAATCACGTGGCTGCTATGCAC
TCTCCGGAGCGTTTGCGAGACGTGTCTGACATGCAACTTCAAACTGCGAAAAACACGGTC
CACATCAAAAGCAACAAGGAGATCACCTTCAACATCGAGTACAAAGAAACTGTTCAAGAC
ATGATCGATTCCGGTGTTAAGGTTCAAAACAGAGCTCAAGTGGTTTTTGATCTTTTCGGC
TCCACTGTTCAGGATTTGGTGGGTGAGATATTTTCTCCCAACTATCCTTATCCCTACCCC
ACATCTGCTGACATCGCTTGGCTGGTTCGTGTGCCCGACGATAACGTGGTTCAACTCTAT
ATCGTCGATATCGATATCGAGGAGTGCTGCGATCGACTCACCATATATGACGGTAACTCT
TTTCACGGGCCGGTGATCGCCATTCTATCCGGTACATTAGCCAATCAGAACAATTTGACA
ATGTACCAGTCCACTGGAAGTAGTATGTCGTTGCATTTAACTTCAGATTGTTCAGAATCA
AAAACTGGATTTAGAGCTATAACTTCGGTTGCTGTAATTGGTCCAACAACAGAAAAACCA
CCTGTTGGAGAAACCACTCCTGGTGTTATTATTGACACAACT

InterProScan

ProSiteProfiles
VIT (IPR013694) - T[1-96] 12.226
Pfam
VIT (IPR013694) - T[7-94] 9.3E-7
ProSiteProfiles
CUB_dom (IPR000859) - T[119-231] 13.59
SMART
CUB_dom (IPR000859) - T[119-231] 2.6E-21
Gene3D
Sperma_CUB_dom_sf (IPR035914) - T[120-230] 4.5E-21
Pfam
CUB_dom (IPR000859) - T[121-226] 4.2E-14
SUPERFAMILY
Sperma_CUB_dom_sf (IPR035914) - T[125-226] 8.24E-26
CDD
CUB_dom (IPR000859) - T[128-226] 5.69953E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value