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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S249.g01532.01.t

Possible name(s)

MALRD1; MFRP; TMPRSS15

Location

S249 [185 / 1,930]

Sequences

Amino acid sequence

Length: 268

>Phfumi.CG.MTP2014.S249.g01532.01.p
MQMLLLYAVLLFCVLSSCVGYYSNGSMKGNSSISTCNMLQTRKFRLDHSCISRSRAAQTA
LHELSASSLEQCEETCCQSTEGPCDLVYWNSKQKCIVMNYYVLSLCPLLSPTDQRTSPDS
AILFSVSQRVNALLKKHLLRKGYRDGVRTRLGCSADEFVCDNWDCISSKHVCDGKVHCSD
NSDETTCSKCLGSDSQYVDAGSQYIPFNDGDKCKVCICGNNSMPVYCYSATCYPNLATNC
YGPNRDICCQCLSSGDYHEEATEAPGTN

Nucleotide sequence

Length: 804

>Phfumi.CG.MTP2014.S249.g01532.01.t
ATGCAAATGTTGCTGTTATATGCTGTTCTGTTATTTTGTGTGCTATCAAGTTGTGTTGGA
TACTATTCAAATGGCTCAATGAAGGGCAACAGTTCCATTTCAACATGTAACATGTTACAA
ACACGAAAGTTTCGGTTGGACCACAGTTGCATATCAAGATCAAGAGCTGCCCAGACAGCC
TTACACGAGCTGTCTGCATCGAGCTTAGAGCAATGTGAAGAGACATGTTGTCAGTCAACC
GAGGGTCCATGCGATCTTGTCTACTGGAACAGCAAGCAGAAATGCATCGTCATGAATTAC
TACGTCCTGAGTCTGTGTCCTCTTTTGTCTCCAACTGATCAACGTACATCTCCAGATTCA
GCAATTTTATTCAGCGTGTCGCAGAGAGTTAATGCTTTGCTGAAGAAGCATTTGTTGAGG
AAGGGATACAGAGATGGAGTTCGAACTCGTTTGGGCTGCTCTGCTGATGAGTTTGTCTGT
GACAACTGGGATTGCATTTCCTCAAAGCACGTCTGTGATGGCAAAGTGCACTGCTCAGAC
AACTCAGATGAGACGACCTGCTCTAAATGTCTTGGAAGTGACTCGCAATATGTTGATGCA
GGATCTCAGTACATTCCATTCAACGATGGTGACAAATGCAAAGTCTGCATTTGTGGCAAT
AACTCCATGCCTGTGTACTGTTACTCTGCAACTTGTTATCCCAACTTGGCTACCAACTGC
TATGGACCAAACCGTGATATCTGCTGCCAATGTCTGTCGTCTGGAGATTACCATGAAGAG
GCCACAGAAGCACCAGGTACAAAT

InterProScan

SUPERFAMILY
LDL_receptor-like_sf (IPR036055) - T[151-187] 1.3E-9
SMART
LDrepeatLR_classA_rpt (IPR002172) - T[152-189] 1.2E-7
ProSiteProfiles
LDrepeatLR_classA_rpt (IPR002172) - T[152-188] 12.225
Pfam
LDrepeatLR_classA_rpt (IPR002172) - T[153-187] 7.3E-9
CDD
LDrepeatLR_classA_rpt (IPR002172) - T[153-187] 9.33195E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value