Aniseed - Transcript Card

Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S24543.g09884.01.t

Possible name(s)

DNAJC7; SGTA; TTC4

Gene model

Phfumi.CG.MTP2014.S24543.g09884

Location

S24543 [213 / 1,528]

Sequences

Amino acid sequence

Length: 400

>Phfumi.CG.MTP2014.S24543.g09884.01.p
MASTSTPKMTDAERQSLINKLNKETEEFIQDAMERNKDYKYEDGFTADNVEEICATHPAF
MQEQPTQEQIDNNPMLQALQAIQYDDPEDTPEEKAVQLKKDGNFQYKLKKFKLASKVYTE
ALRKKFDNKELRSSLFFNRSAANYHLENFRSALLDASEAVKLIPDYVKALVKCAQCCNAL
KRYQDAVDWCSILLSLDADNSVGNDIYTKSKNSLQIQKRDQRKIERLKEKQKQTKEKLIS
AIKQREIQLAVIPKDSYVSSEDEDDESLKLSGFETLNVSKSSVHLDDKGNLIWPVMFAYP
EFKTTDFIEEFHETSRFIHHLSMMFEQPPDWDTEHRYKLEDLEIYYENHQTENLHKVDME
STLLGALKNKSMVVHAGTPNFFILTRTSPFYTCFMSNHNV

Nucleotide sequence

Length: 1,200

>Phfumi.CG.MTP2014.S24543.g09884.01.t
ATGGCTAGCACAAGTACACCGAAAATGACAGATGCTGAAAGGCAGTCATTGATCAACAAG
CTGAATAAGGAAACTGAGGAATTTATTCAGGATGCAATGGAAAGAAACAAAGACTACAAA
TACGAAGATGGCTTCACAGCTGACAATGTTGAGGAAATTTGTGCTACTCATCCCGCTTTT
ATGCAAGAGCAGCCAACACAGGAGCAGATAGACAACAATCCTATGCTTCAAGCATTACAA
GCAATTCAATACGATGACCCTGAAGATACACCAGAAGAAAAGGCGGTTCAATTAAAAAAG
GATGGAAACTTTCAATACAAACTCAAAAAGTTTAAACTAGCTAGCAAAGTGTACACAGAG
GCACTTAGAAAAAAGTTTGACAATAAAGAACTCAGATCAAGCCTGTTTTTCAATCGCTCA
GCTGCAAATTATCATCTTGAGAATTTTAGGTCTGCATTGCTGGATGCTAGTGAAGCTGTA
AAATTAATCCCAGACTATGTTAAGGCCCTGGTAAAGTGCGCCCAGTGCTGTAATGCTTTG
AAACGTTATCAGGATGCCGTTGACTGGTGCAGCATTCTGTTAAGCTTGGATGCAGATAAC
TCAGTTGGAAATGACATTTATACAAAGTCCAAGAACTCTCTTCAAATTCAAAAACGGGAT
CAACGGAAAATAGAGCGACTGAAAGAAAAACAAAAACAAACTAAAGAAAAACTGATAAGT
GCTATTAAGCAACGGGAAATTCAGCTTGCAGTTATTCCTAAAGATTCATATGTTAGTTCT
GAGGATGAAGATGATGAGTCTCTAAAGTTAAGTGGATTTGAAACACTTAACGTTTCGAAA
TCATCTGTACATTTGGATGACAAAGGCAACCTCATTTGGCCTGTGATGTTTGCGTATCCT
GAATTCAAAACAACAGACTTTATTGAAGAGTTTCATGAAACGTCAAGATTTATCCATCAC
TTGAGCATGATGTTCGAGCAACCTCCAGATTGGGATACTGAACACAGATATAAGCTGGAA
GATCTTGAAATTTATTATGAGAATCACCAGACTGAAAACCTGCATAAAGTTGATATGGAG
AGCACACTTCTTGGTGCATTAAAGAACAAGAGTATGGTCGTACATGCAGGCACCCCAAAC
TTTTTCATACTGACAAGGACTTCTCCATTCTACACATGTTTTATGTCTAACCATAATGTC

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[91-217] 1.4E-23
SUPERFAMILY	TPR-like_helical_dom_sf (IPR011990) - T[94-204] 2.66E-19
ProSiteProfiles	TPR-contain_dom (IPR013026) - T[95-200] 10.877
SMART	TPR_repeat (IPR019734) - T[95-128] 36.0 - T[133-166] 17.0 - T[167-200] 1.4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TTC4_HUMAN	38.606 %	249	2.71E-79