- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2379.g04789.01.t
Possible name(s)
RNF17; TDRD5; TDRD7
Gene model
Location
S2379 [4,333 / 7,519]
Amino acid sequence
Length: 1,061
>Phfumi.CG.MTP2014.S2379.g04789.01.p
EEKKTTRYANTMENSDKRRVVLRTESDEAFNTFINPLMSIENVCKVVTTTKPITEPETPK
PTVAISNEVKNNLKKLLDVNPSGIHATKIATVYKETFQLVLPDHIVSSVLNGNYADILTV
NIVTNYSGTKHIILPKNDNAGKAEGKSRYLSPTKPKSEKLQIFAHGSLLPGKEYQVTVVN
VVECNQVYVQLSSEENKMCQMNRIINESQQTKVSAAEQQNFKFSSGFVVVTSEGRRVVIK
EVFDTKCDVLELDFGNVSQVPTNCLYPLPSSAAQFQEFAICCSMHRPVDTGSAWHPESCD
KFKNKFLDEHLTMKVVEISSLQSVETERPIVKHSVYFYHNGFNINSRLIHEENEHILSMQ
ISVHDPFLYQPKESAKLPDDDYCELFVFNASCTTEVEVCVIGSGYSDGLVELETEMLEYY
TKSDDSFALAQPPPLNCIYAVLSEDACVRGKLISIDGNQGNIYLVDNGELETVDLLDLRP
LTEEFCKFPLQVISVSLAGLEHNILASNSDVLQKLNDAVCYKPCIGHIVSRSATSSKRPC
NYVELIDTSGEVDININQLCASLVMEESYFPSPPEINKTRPVKVVHTENDLIYVQVGGNG
LQLLNASLDKLQSSLQNQRVSPTKFPNDLYPGKLCLVNVAKKLYRARVEQVKDTKVRGIS
VFLIDIGRTLQVIRGSLMKLDCESLLSIPPQAICCQLSPAFGDNGCFGSEGDFLYVGLGE
VKDWSSQNVLMRVNEISDSEEPHLVSMWIESDNKIKTCIVSDKEINKRTHAEIDTHLQSS
SMSSHFSSATSTSSEADTSKDVSSLAMPLDTSEVNKASKSASVDFDDLVQKILMQIKDHN
LNDVNDNYLEMHKLASSNMSNFPGSLVPVKVESALSPSYVQLIPLQNIKQRAILETAMTQ
FYKQTCNGEPSPVDIQKGCTYAFQGSNNQAANVWYRVTVQSKINNLVSVYFMDYGHCDVI
DGVSLFRYLDSHFSDVPPLSMTARLAGIEPIGTDWPHSVCSQFQSLVTGCNFYAHVLKRS
LDPLLHDRVVFHACLCDTSKDCDVWLEEMLVEVWKCAKYIA
Nucleotide sequence
Length: 3,186
>Phfumi.CG.MTP2014.S2379.g04789.01.t
GAAGAAAAAAAGACAACAAGATATGCAAACACAATGGAAAATTCTGATAAAAGAAGAGTT
GTGCTACGAACAGAAAGCGATGAAGCGTTTAACACATTTATTAACCCACTGATGTCCATA
GAAAATGTTTGCAAAGTTGTTACTACCACTAAACCCATAACTGAACCTGAGACTCCCAAA
CCAACAGTTGCAATTTCGAATGAAGTGAAAAACAACCTAAAGAAGCTATTGGATGTTAAT
CCATCTGGAATACATGCAACCAAAATTGCAACTGTCTACAAGGAAACATTTCAACTAGTT
TTGCCAGACCACATTGTGTCCTCAGTTTTGAATGGAAATTATGCAGACATTCTCACTGTA
AATATTGTTACAAATTATTCTGGTACGAAACACATTATCCTTCCTAAAAACGACAATGCA
GGTAAAGCAGAAGGGAAATCCAGGTACCTTAGTCCAACAAAGCCTAAATCTGAAAAACTG
CAGATTTTTGCCCATGGGTCATTGTTGCCTGGAAAGGAATACCAGGTTACTGTGGTAAAT
GTCGTGGAATGCAACCAAGTTTATGTCCAGTTGAGCTCAGAAGAAAATAAAATGTGTCAA
ATGAACAGAATCATCAACGAGTCGCAGCAGACAAAAGTGTCTGCTGCTGAACAACAGAAT
TTTAAGTTTTCATCTGGTTTTGTGGTAGTTACCTCAGAAGGACGCAGAGTGGTTATCAAG
GAAGTTTTTGATACTAAATGTGATGTTCTCGAACTTGATTTTGGCAACGTATCTCAGGTT
CCAACCAACTGTCTTTATCCATTGCCTTCATCTGCTGCCCAATTTCAGGAGTTTGCTATC
TGTTGCTCCATGCATCGGCCAGTTGATACAGGATCAGCGTGGCATCCTGAAAGTTGTGAC
AAATTTAAAAACAAGTTTCTTGATGAGCATCTCACAATGAAAGTGGTTGAAATATCATCC
TTGCAGTCTGTAGAGACGGAAAGGCCTATTGTCAAGCACTCTGTTTACTTTTACCACAAT
GGGTTTAATATAAACTCCCGTTTGATTCATGAGGAAAATGAACACATTTTGAGCATGCAG
ATATCAGTCCATGATCCTTTTCTTTATCAGCCCAAAGAGTCTGCAAAGCTACCAGATGAT
GACTACTGTGAATTATTTGTTTTTAATGCCTCCTGTACCACTGAAGTTGAGGTCTGCGTA
ATAGGAAGTGGCTACTCTGATGGTCTTGTTGAATTAGAAACTGAAATGCTGGAGTATTAT
ACTAAATCTGATGACAGTTTTGCTTTGGCTCAGCCTCCACCACTGAATTGCATTTATGCA
GTTTTGTCTGAAGACGCTTGTGTTCGTGGAAAACTGATTTCAATTGATGGCAACCAAGGT
AACATCTACCTTGTTGACAATGGTGAACTGGAGACTGTTGATTTACTTGACTTACGGCCG
TTGACGGAGGAGTTTTGTAAGTTTCCATTGCAAGTTATCAGTGTGTCTTTGGCTGGTCTT
GAGCACAACATACTTGCTTCCAACTCCGATGTTCTGCAGAAACTTAATGATGCTGTTTGC
TACAAGCCATGTATTGGTCACATTGTGAGTCGCAGTGCAACAAGCAGCAAGAGACCATGC
AACTATGTGGAGCTGATTGACACCAGCGGAGAAGTTGACATCAATATCAATCAACTATGT
GCAAGCCTTGTAATGGAGGAAAGCTATTTTCCATCACCTCCTGAAATAAACAAGACCAGA
CCAGTCAAGGTAGTGCACACTGAGAATGACCTCATTTATGTGCAGGTGGGAGGAAATGGC
TTGCAACTGCTCAATGCTTCACTTGATAAGTTGCAAAGCTCACTGCAAAACCAACGAGTT
TCGCCAACAAAGTTTCCAAACGATTTATATCCTGGCAAGCTGTGTTTGGTAAATGTTGCA
AAGAAATTGTACCGAGCGAGAGTCGAACAAGTAAAAGATACCAAAGTGCGTGGTATTTCG
GTGTTCCTGATAGATATTGGGAGAACTTTGCAAGTCATCCGAGGATCCCTGATGAAACTT
GATTGTGAATCACTGCTGTCTATACCGCCGCAAGCTATCTGCTGCCAGCTTTCTCCTGCA
TTTGGTGACAATGGGTGTTTTGGATCAGAGGGCGATTTTCTGTATGTTGGGCTGGGTGAG
GTGAAAGACTGGTCTTCTCAAAATGTGCTGATGAGAGTAAATGAGATTTCTGACAGCGAA
GAGCCACATCTTGTTTCCATGTGGATTGAAAGTGACAACAAGATCAAGACCTGCATTGTT
TCAGATAAAGAGATAAACAAGCGAACACATGCTGAAATTGATACCCATCTCCAGTCCTCA
TCAATGTCTTCACACTTTTCAAGTGCTACTTCCACAAGTTCAGAAGCAGACACAAGCAAG
GATGTTTCAAGTCTTGCAATGCCCCTTGACACATCAGAGGTCAACAAAGCAAGTAAAAGC
GCAAGCGTAGATTTTGATGATCTGGTGCAGAAAATTCTCATGCAGATAAAAGACCACAAT
CTCAATGATGTCAATGACAACTACCTGGAAATGCATAAGCTTGCCAGCAGTAACATGTCA
AACTTTCCTGGGTCTTTGGTACCTGTGAAAGTTGAGAGTGCACTGTCACCGAGCTATGTT
CAACTGATACCGCTTCAAAACATCAAACAGCGTGCAATTCTAGAAACTGCAATGACACAG
TTCTACAAACAAACATGTAATGGAGAACCAAGTCCTGTGGATATTCAGAAAGGCTGCACA
TATGCATTTCAGGGCTCAAACAACCAAGCAGCTAATGTCTGGTATAGAGTAACAGTTCAA
AGCAAAATCAACAATTTGGTCAGTGTTTACTTTATGGATTATGGCCACTGTGATGTCATA
GATGGTGTTTCCCTCTTTCGGTACTTGGACTCACATTTTAGCGATGTTCCACCCTTAAGC
ATGACTGCCCGTTTGGCTGGCATTGAGCCTATTGGGACAGACTGGCCGCATTCTGTCTGT
AGTCAGTTTCAGTCATTGGTAACTGGATGCAATTTTTATGCCCATGTACTTAAAAGGTCC
CTTGATCCACTTTTGCATGATCGTGTTGTATTTCATGCCTGCTTGTGTGACACTTCAAAA
GACTGTGATGTTTGGCTGGAAGAGATGTTAGTTGAAGTCTGGAAATGTGCAAAGTATATT
GCCTAA
| Pfam |
Tudor (IPR002999) - T[170-285] 2.7E-14 - T[378-499] 2.5E-10 - T[605-698] 1.2E-9 - T[869-987] 2.5E-12 |
| Gene3D |
SNase_OB-fold_sf (IPR035437) - T[176-351] 3.6E-14 - T[406-557] 7.5E-16 - T[877-1047] 4.0E-19 |
| SMART |
Tudor (IPR002999) - T[219-273] 6.7 - T[431-486] 8.6 - T[627-685] 0.22 - T[913-974] 8.8 |
| ProSiteProfiles |
Tudor (IPR002999) - T[628-687] 8.528 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TDRD7_HUMAN | 24.713 % | 137 | 7.49E-33 |