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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2246.g04647.01.t

Possible name(s)

CHRNA1; CHRNA3; CHRNA6

Gene model

Phfumi.CG.MTP2014.S2246.g04647

Location

S2246 [16,536 / 18,451]

Sequences

Amino acid sequence

Length: 171

>Phfumi.CG.MTP2014.S2246.g04647.01.p
GCYKHYIQYACCRGPYVDMTYYFVLQRRPLYLLINILFPTFLFSVLTCAVFYLPSDAGEK
MTLSISLLLSLIVFLLVIVEAIPSTAKGVPLLCQYIVFTMILVCLSIMITVVVINIHYRG
PTTHTMSERVKKIFMVWLPKFALSSTMKKLDPYAEKKIKAAKPPKLCNDIT

Nucleotide sequence

Length: 513

>Phfumi.CG.MTP2014.S2246.g04647.01.t
GGCTGCTACAAACATTACATACAATACGCGTGTTGCAGAGGACCTTACGTGGACATGACG
TACTACTTTGTGTTGCAACGTCGTCCGCTTTATCTTCTCATAAACATCTTATTTCCGACA
TTCCTCTTCTCCGTTTTAACTTGCGCTGTGTTTTACCTTCCCTCGGACGCGGGTGAAAAA
ATGACCCTCAGTATCTCGCTGCTCCTGTCACTCATCGTGTTCTTGCTCGTCATTGTGGAA
GCGATCCCGTCGACAGCGAAGGGAGTTCCCCTGTTGTGTCAGTACATCGTGTTCACTATG
ATCTTGGTGTGTCTTTCAATTATGATTACTGTGGTGGTGATTAACATACATTACCGAGGA
CCTACAACACACACTATGTCAGAGAGAGTTAAAAAGATCTTCATGGTTTGGCTTCCGAAG
TTTGCTTTGAGTTCCACGATGAAAAAGCTTGATCCTTACGCTGAGAAGAAAATCAAGGCT
GCTAAACCTCCAAAGTTGTGTAACGATATTACA

InterProScan

PANTHER
Neur_channel (IPR006201) - T[2-157] 6.6E-56
SUPERFAMILY
Neuro-gated_channel_TM_sf (IPR036719) - T[29-149] 1.44E-40
Pfam
Neurotrans-gated_channel_TM (IPR006029) - T[37-150] 1.1E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACHA3_HUMAN 57.971 % 155 1.16E-45
ACHA6_HUMAN 57.447 % 156 5.12E-46
ACHA_HUMAN 56.329 % 163 1.13E-48