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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.892.v1....' > 
  2. Clone 'AHC0AAA197YN04' > 
  3. Clone 'cima8115241' > 
  4. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2206.g04613.01.t

Possible name(s)

CUX1; ONECUT1; ONECUT2

Gene model

Phfumi.CG.MTP2014.S2206.g04613

Location

S2206 [3,309 / 5,100]

Sequences

Amino acid sequence

Length: 597

>Phfumi.CG.MTP2014.S2206.g04613.01.p
SSPLSLPCFQVRFMPIPFGAHPPHWVDSADNTNTHPSNQQHQQQQFSDQGSMATTASGEF
NGFSHLHHHHHHHSSEQYYRHEHYHHHFHHPTFENNFPASGAYHDRAVSPPPDVQSLQYK
DCNGQNSLHPGSAEKEKRSDENRGHSPNYLPPIADALLRRDNVQELKKIQADESRCSAND
TCSSFGHEDKSADITDLEDLSANTVTTQGKEKKDDKVEDGPEDFSVKTESEHVEMMYPFT
RNFNPFSSGNNRSHHEDLSGLMSVDTSGSVEAFFRSESTLSSTSAQPVESVTTLAASGND
GPSYATLTPLQPLPPIATVSDKYIPTNTNNYATLMQQEKTETSYSKMGGMGHSLPPLSNR
MILNGLAAQSRGGMQSQAALEAVNHAAAAAAVGLTHYNKTVSMLPSNIIPPPPAQTSNHY
DPHMFSRIDQCNDASAALQGDPMFPPHPAAFTHQYPNTIHDFAANVQVSSPPERRNLRSG
SGQCSLETPKTRGGGQDRSNGGGNGSGSGSSRVQQVEEVNTKEVASKITQELKRYSIPQA
IFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSSLRLAGE

Nucleotide sequence

Length: 1,791

>Phfumi.CG.MTP2014.S2206.g04613.01.t
AGCAGTCCACTCTCGCTGCCCTGTTTTCAAGTCAGGTTTATGCCAATACCCTTCGGTGCT
CACCCCCCACACTGGGTCGACTCAGCCGACAATACCAACACGCATCCATCAAACCAACAG
CACCAGCAACAACAGTTTTCCGATCAAGGATCAATGGCGACAACCGCTTCCGGAGAGTTT
AACGGATTCAGTCACCTGCATCACCACCATCACCACCACAGTTCGGAGCAGTATTACCGC
CACGAGCATTACCATCATCATTTTCATCATCCAACGTTCGAAAATAACTTTCCAGCTTCT
GGAGCATACCACGACCGTGCTGTCAGCCCGCCACCAGACGTGCAAAGCCTGCAGTACAAG
GATTGCAACGGGCAAAACTCACTCCATCCTGGGTCCGCCGAAAAGGAGAAGCGTAGCGAT
GAGAACCGGGGTCATTCCCCCAACTACCTACCCCCGATCGCTGACGCTCTGCTGCGGCGG
GACAACGTCCAGGAACTAAAGAAAATTCAGGCTGACGAAAGCCGGTGTTCAGCTAATGAT
ACTTGCTCCAGTTTTGGGCACGAAGATAAAAGCGCTGACATTACGGACTTGGAGGACTTG
TCGGCAAACACAGTCACAACCCAAGGTAAGGAAAAGAAAGACGATAAGGTGGAAGACGGC
CCGGAGGACTTCTCCGTAAAGACCGAGAGTGAGCACGTGGAAATGATGTACCCCTTTACA
CGCAACTTCAACCCATTCAGCAGCGGTAACAATCGCAGCCACCATGAAGATTTGAGTGGA
TTGATGTCTGTTGATACCTCGGGATCGGTTGAGGCTTTTTTTCGTTCCGAATCCACGCTT
TCAAGTACATCAGCACAGCCTGTGGAGAGTGTGACCACGCTTGCGGCGTCCGGAAACGAT
GGACCGAGTTATGCTACATTGACGCCCCTACAACCGTTGCCCCCAATCGCAACTGTATCA
GATAAGTACATCCCGACAAACACAAACAACTACGCCACTTTGATGCAGCAAGAAAAAACC
GAAACATCTTACTCGAAAATGGGTGGAATGGGCCACAGTCTTCCCCCACTGTCCAACAGA
ATGATTCTTAATGGCTTGGCGGCTCAGTCCAGAGGTGGAATGCAGTCACAAGCCGCCCTT
GAGGCCGTCAACCATGCCGCTGCAGCAGCTGCTGTTGGGCTTACTCACTACAACAAGACT
GTTTCAATGTTGCCGTCCAACATCATTCCGCCGCCACCTGCACAGACTTCTAATCACTAT
GACCCGCACATGTTTAGCAGGATCGACCAATGCAACGACGCAAGTGCGGCCCTTCAAGGC
GACCCTATGTTTCCACCACACCCAGCAGCCTTCACACATCAGTATCCAAACACTATCCAC
GACTTTGCTGCCAACGTGCAGGTCAGCTCACCGCCCGAAAGAAGGAACCTGCGTTCCGGA
TCGGGCCAGTGCTCTCTCGAAACGCCGAAAACCCGAGGCGGAGGGCAGGATAGATCCAAC
GGAGGTGGAAACGGTAGCGGATCCGGCTCCTCCCGTGTGCAGCAGGTCGAAGAAGTCAAC
ACCAAGGAGGTGGCGTCAAAAATCACCCAAGAGTTGAAAAGATACAGTATTCCTCAGGCC
ATCTTCGCACAGAGAGTTCTGTGCCGCAGTCAAGGAACCCTTTCCGATCTCTTGCGCAAC
CCCAAACCCTGGTCGAAATTGAAGAGTGGCCGTGAGACCTTTCGCCGAATGTGGAAGTGG
CTGCAAGAACCGGAATTTCAACGCATGTCCTCGCTGCGTTTGGCGGGTGAG

InterProScan

ProSiteProfiles
CUT_dom (IPR003350) - T[510-596] 30.237
SUPERFAMILY
Lambda_DNA-bd_dom_sf (IPR010982) - T[510-594] 4.26E-35
SMART
CUT_dom (IPR003350) - T[511-596] 1.4E-42
Pfam
CUT_dom (IPR003350) - T[517-590] 3.0E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ONEC2_HUMAN 85.556 % 167 3.38E-45
HNF6_HUMAN 86.022 % 169 2.43E-46