- Transcript 'KH2012:KH.C11.82.v3....' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2204.g04610.02.t
Possible name(s)
HNRNPL; HNRNPLL
Gene model
Location
S2204 [296 / 6,845]
Amino acid sequence
Length: 403
>Phfumi.CG.MTP2014.S2204.g04610.02.p
MASYEGHQAKRQRLSENGAANATDEYRGEREHKFREGPDQPNKVLLFTIMNAVYPITTSA
QRAKASLNGADIYSGCCTLKIEWAKPARLNVYKNDDETWDYTGALDATESPSQPALLGDA
PAGYSNNPGYGARPPRSMPGRGRPMMPRGRGMMPPRPPRPGLMGVTSSNTGGGGEYMEDY
GGQDMGGFNQSPVLMVYGLNPEKMNCDRLFNVLCLYGNVMKVKFLKSKPGTAMVQMGDPS
AVERAISSLSGMKFFDDKMVVGHSKQMYLTDTGAPVSEQADGSPSQVDYSNSRNNRFTTT
EQAAKNRIQNPSKVLHYYNAPVDFDEDKMKEICKEFDLVEPKKFTPFKSKSERSSSGLME
FETKPEALEVLTMVNHYKMDNPNGRFPYILKLCFSTSSTATRE
Nucleotide sequence
Length: 1,212
>Phfumi.CG.MTP2014.S2204.g04610.02.t
ATGGCTTCGTATGAAGGACACCAGGCAAAACGGCAAAGATTGTCTGAAAATGGAGCAGCC
AATGCAACGGATGAGTACAGAGGCGAAAGAGAACACAAATTCAGAGAAGGACCTGACCAA
CCTAACAAAGTTCTTCTGTTTACGATTATGAATGCAGTTTATCCCATCACTACTTCTGCT
CAACGGGCTAAAGCTTCACTAAATGGTGCTGATATTTATTCTGGCTGCTGCACTCTTAAA
ATTGAGTGGGCAAAGCCTGCAAGACTCAATGTTTACAAAAATGATGATGAAACATGGGAT
TATACTGGAGCCCTGGATGCAACAGAATCTCCAAGCCAACCAGCATTACTTGGAGATGCA
CCAGCAGGGTACAGTAATAACCCTGGGTATGGGGCAAGACCACCACGAAGTATGCCAGGA
AGAGGTCGGCCAATGATGCCAAGAGGACGGGGAATGATGCCACCAAGACCACCACGACCT
GGTCTAATGGGTGTCACATCAAGCAACACGGGTGGTGGTGGTGAATACATGGAGGACTAT
GGAGGCCAAGACATGGGTGGTTTTAACCAGAGTCCTGTACTCATGGTATATGGACTAAAC
CCTGAAAAGATGAACTGTGACAGATTGTTCAATGTCCTTTGTCTCTATGGCAATGTTATG
AAGGTGAAGTTTTTGAAAAGCAAGCCTGGCACTGCCATGGTGCAGATGGGTGACCCCTCC
GCAGTGGAAAGGGCAATCAGCAGCCTTTCTGGGATGAAGTTTTTTGATGACAAAATGGTA
GTTGGACATTCCAAGCAAATGTATCTTACGGATACAGGGGCTCCAGTAAGTGAACAAGCT
GATGGATCGCCCAGCCAAGTGGATTACTCAAATTCAAGAAACAACAGATTTACAACCACA
GAGCAAGCAGCCAAAAACAGAATTCAAAACCCGTCAAAGGTTCTTCACTACTACAACGCT
CCTGTGGATTTCGATGAGGACAAGATGAAAGAGATTTGCAAGGAGTTTGATCTTGTGGAG
CCAAAAAAGTTTACACCATTCAAGTCAAAAAGCGAACGCAGTTCCTCTGGCCTAATGGAG
TTTGAAACGAAACCAGAAGCTCTTGAGGTGCTCACCATGGTGAACCATTACAAGATGGAC
AACCCAAATGGCCGATTTCCGTACATCCTGAAGCTATGTTTTTCCACATCTTCCACTGCC
ACAAGAGAATAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[57-106] 1.0E-13 - T[186-290] 5.8E-29 - T[301-394] 1.2E-34 |
| TIGRFAM |
HnRNP-L/PTB (IPR006536) - T[58-398] 1.7E-95 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[179-265] 1.48E-13 - T[305-381] 8.5E-5 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[192-266] 10.138 |
| SMART |
RRM_dom (IPR000504) - T[193-262] 1.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTBP3_HUMAN | 28.488 % | 107 | 2.09E-25 |
| HNRPL_HUMAN | 47.619 % | 334 | 7.34E-110 |
| HNRLL_HUMAN | 42.145 % | 283 | 1.01E-90 |