- Clone 'AHC0AAA12YE22' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2204.g04610.01.t
Possible name(s)
HNRNPL; HNRNPLL
Gene model
Location
S2204 [296 / 6,654]
Amino acid sequence
Length: 425
>Phfumi.CG.MTP2014.S2204.g04610.01.p
MASYEGHQAKRQRLSENGAANATDEYRGEREHKFREGPDQPNKVLLFTIMNAVYPITTEV
IHTICKPCGEVQRIVIFRKRGVQAMVEFNSIQSAQRAKASLNGADIYSGCCTLKIEWAKP
ARLNVYKNDDETWDYTGALDATESPSQPALLGDAPAGYSNNPGYGARPPRSMPGRGRPMM
PRGRGMMPPRPPRPGLMGVTSSNTGGGGEYMEDYGGQDMGGFNQSPVLMVYGLNPEKMNC
DRLFNVLCLYGNVMKVKFLKSKPGTAMVQMGDPSAVERAISSLSGMKFFDDKMVVGHSKQ
MYLTDTGAPVSEQADGSPSQVDYSNSRNNRFTTTEQAAKNRIQNPSKVLHYYNAPVDFDE
DKMKEICKEFDLVEPKKFTPFKSKSERSSSGLMEFETKPEALEVLTMVNHYKMDNPSMFT
KRVIN
Nucleotide sequence
Length: 1,275
>Phfumi.CG.MTP2014.S2204.g04610.01.t
ATGGCTTCGTATGAAGGACACCAGGCAAAACGGCAAAGATTGTCTGAAAATGGAGCAGCC
AATGCAACGGATGAGTACAGAGGCGAAAGAGAACACAAATTCAGAGAAGGACCTGACCAA
CCTAACAAAGTTCTTCTGTTTACGATTATGAATGCAGTTTATCCCATCACTACTGAAGTG
ATCCATACTATATGCAAACCCTGTGGGGAAGTGCAAAGAATTGTGATTTTCCGGAAGCGT
GGAGTGCAAGCCATGGTTGAATTTAATTCAATTCAATCTGCTCAACGGGCTAAAGCTTCA
CTAAATGGTGCTGATATTTATTCTGGCTGCTGCACTCTTAAAATTGAGTGGGCAAAGCCT
GCAAGACTCAATGTTTACAAAAATGATGATGAAACATGGGATTATACTGGAGCCCTGGAT
GCAACAGAATCTCCAAGCCAACCAGCATTACTTGGAGATGCACCAGCAGGGTACAGTAAT
AACCCTGGGTATGGGGCAAGACCACCACGAAGTATGCCAGGAAGAGGTCGGCCAATGATG
CCAAGAGGACGGGGAATGATGCCACCAAGACCACCACGACCTGGTCTAATGGGTGTCACA
TCAAGCAACACGGGTGGTGGTGGTGAATACATGGAGGACTATGGAGGCCAAGACATGGGT
GGTTTTAACCAGAGTCCTGTACTCATGGTATATGGACTAAACCCTGAAAAGATGAACTGT
GACAGATTGTTCAATGTCCTTTGTCTCTATGGCAATGTTATGAAGGTGAAGTTTTTGAAA
AGCAAGCCTGGCACTGCCATGGTGCAGATGGGTGACCCCTCCGCAGTGGAAAGGGCAATC
AGCAGCCTTTCTGGGATGAAGTTTTTTGATGACAAAATGGTAGTTGGACATTCCAAGCAA
ATGTATCTTACGGATACAGGGGCTCCAGTAAGTGAACAAGCTGATGGATCGCCCAGCCAA
GTGGATTACTCAAATTCAAGAAACAACAGATTTACAACCACAGAGCAAGCAGCCAAAAAC
AGAATTCAAAACCCGTCAAAGGTTCTTCACTACTACAACGCTCCTGTGGATTTCGATGAG
GACAAGATGAAAGAGATTTGCAAGGAGTTTGATCTTGTGGAGCCAAAAAAGTTTACACCA
TTCAAGTCAAAAAGCGAACGCAGTTCCTCTGGCCTAATGGAGTTTGAAACGAAACCAGAA
GCTCTTGAGGTGCTCACCATGGTGAACCATTACAAGATGGACAACCCAAGTATGTTTACC
AAACGCGTAATAAAC
| TIGRFAM |
HnRNP-L/PTB (IPR006536) - T[35-417] 1.5E-118 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[39-140] 2.1E-38 - T[220-324] 6.3E-29 - T[335-424] 2.7E-28 |
| Pfam |
DUF3355 (IPR021790) - T[42-119] 1.7E-12 |
| SMART |
RRM_dom (IPR000504) - T[44-114] 2.9E-4 - T[227-296] 1.7E-7 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[52-133] 1.63E-16 - T[213-299] 1.61E-13 - T[339-416] 9.05E-5 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[226-300] 10.138 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTBP3_HUMAN | 29.759 % | 137 | 2.45E-35 |
| HNRPL_HUMAN | 53.234 % | 383 | 1.02E-128 |
| HNRLL_HUMAN | 45.361 % | 323 | 9.6E-106 |