- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S21.g00380.04.t
Possible name(s)
SDHB
Gene model
Location
S21 [26,624 / 29,568]
Amino acid sequence
Length: 262
>Phfumi.CG.MTP2014.S21.g00380.04.p
VLRKSCQTAGLFTQTARCAASAAAVEKEQPRIKTFSVYRWNPEEKNSQPYMKKYKVDLND
CGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIRGTNTLACLSRIDTNLSKPTKI
YPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGVENHQSVEDRQKLDGLYECIL
CACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYRAERLDRLNDPFSLYRCHTIMN
CTKTCPKGLNPGLAIAELKKML
Nucleotide sequence
Length: 786
>Phfumi.CG.MTP2014.S21.g00380.04.t
GTGCTGCGAAAATCGTGCCAAACAGCCGGTCTATTTACTCAAACTGCAAGATGTGCCGCC
TCTGCAGCTGCCGTAGAAAAAGAGCAACCAAGAATTAAAACTTTTTCTGTCTATCGTTGG
AATCCAGAAGAAAAGAATTCCCAACCATACATGAAAAAATATAAAGTTGATTTAAATGAT
TGCGGTCCTATGGTTCTTGATGCTTTAATCAAGATCAAGAATGAACAAGACCCAACATTA
ACATTCCGGCGTTCATGTCGCGAAGGAATTTGCGGATCTTGTGCGATGAACATTCGTGGA
ACAAACACCTTAGCTTGCTTATCGCGAATTGATACAAATTTGAGCAAACCAACCAAGATC
TATCCACTCCCTCACATGTACGTCGTCAAGGATCTCGTCCCAGATATGGCAAACTTCTAT
GCCCAATATCGGTCAATTGAACCATTCTTGAAGCAGAAAGATGTTTCGAAAGCTGGTGTG
GAAAATCATCAATCAGTTGAGGACAGACAAAAGTTGGATGGCTTGTATGAATGCATCTTG
TGTGCGTGTTGTTCCACATCCTGCCCAAGTTACTGGTGGAATCCAACAAAGTATTTGGGA
CCTGCAGTTTTGATGCAGGCATACAGATGGATCATCGACAGTCGGGATGAATACAGGGCA
GAGAGATTAGATCGGCTCAATGACCCCTTCTCATTGTACAGATGCCATACAATCATGAAT
TGCACTAAGACATGTCCAAAGGGACTCAATCCTGGTTTGGCAATTGCAGAGTTGAAGAAA
ATGTTG
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[21-135] 1.6E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[31-135] 2.02E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[33-126] 9.131 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[34-140] 4.7E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[37-259] 1.6E-83 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[65-114] 0.00211099 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[86-94] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[136-262] 8.6E-60 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[137-261] 6.45E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[168-198] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[178-189] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 72.941 % | 402 | 5.67E-143 |
