- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S21.g00380.02.t
Possible name(s)
SDHB
Gene model
Location
S21 [26,582 / 29,616]
Amino acid sequence
Length: 291
>Phfumi.CG.MTP2014.S21.g00380.02.p
SSACVLTMSGFGISRTVLRKSCQTAGLFTQTARCAASAAAVEKEQPRIKTFSVYRWNPEE
KNSQPYMKKYKVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIRGTNTL
ACLSRIDTNLSKPTKIYPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGVENHQ
SVEDRQKLDGLYECILCACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYRAERLD
RLNDPFSLYRCHTIMNCTKTCPKGLNPGLAIAELKKMLATHNSAAVAISQK
Nucleotide sequence
Length: 876
>Phfumi.CG.MTP2014.S21.g00380.02.t
AGTTCAGCTTGTGTTCTAACCATGTCTGGGTTTGGGATTTCTCGTACAGTGCTGCGAAAA
TCGTGCCAAACAGCCGGTCTATTTACTCAAACTGCAAGATGTGCCGCCTCTGCAGCTGCC
GTAGAAAAAGAGCAACCAAGAATTAAAACTTTTTCTGTCTATCGTTGGAATCCAGAAGAA
AAGAATTCCCAACCATACATGAAAAAATATAAAGTTGATTTAAATGATTGCGGTCCTATG
GTTCTTGATGCTTTAATCAAGATCAAGAATGAACAAGACCCAACATTAACATTCCGGCGT
TCATGTCGCGAAGGAATTTGCGGATCTTGTGCGATGAACATTCGTGGAACAAACACCTTA
GCTTGCTTATCGCGAATTGATACAAATTTGAGCAAACCAACCAAGATCTATCCACTCCCT
CACATGTACGTCGTCAAGGATCTCGTCCCAGATATGGCAAACTTCTATGCCCAATATCGG
TCAATTGAACCATTCTTGAAGCAGAAAGATGTTTCGAAAGCTGGTGTGGAAAATCATCAA
TCAGTTGAGGACAGACAAAAGTTGGATGGCTTGTATGAATGCATCTTGTGTGCGTGTTGT
TCCACATCCTGCCCAAGTTACTGGTGGAATCCAACAAAGTATTTGGGACCTGCAGTTTTG
ATGCAGGCATACAGATGGATCATCGACAGTCGGGATGAATACAGGGCAGAGAGATTAGAT
CGGCTCAATGACCCCTTCTCATTGTACAGATGCCATACAATCATGAATTGCACTAAGACA
TGTCCAAAGGGACTCAATCCTGGTTTGGCAATTGCAGAGTTGAAGAAAATGTTGGCAACC
CATAATTCTGCAGCAGTTGCAATTTCTCAAAAATAA
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[37-151] 2.1E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[47-151] 2.63E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[49-142] 9.131 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[50-156] 6.0E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[53-275] 2.2E-83 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[81-130] 0.00238136 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[102-110] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[152-287] 1.0E-60 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[153-280] 2.09E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[184-214] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[194-205] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 70.943 % | 409 | 2.41E-145 |
