- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S21.g00380.01.t
Possible name(s)
SDHB
Gene model
Location
S21 [26,582 / 29,589]
Amino acid sequence
Length: 282
>Phfumi.CG.MTP2014.S21.g00380.01.p
GFGISRTVLRKSCQTAGLFTQTARCAASAAAVEKEQPRIKTFSVYRWNPEEKNSQPYMKK
YKVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIRGTNTLACLSRIDTN
LSKPTKIYPLPHMYVVKDLVPDMANFYAQYRSIEPFLKQKDVSKAGVENHQSVEDRQKLD
GLYECILCACCSTSCPSYWWNPTKYLGPAVLMQAYRWIIDSRDEYRAERLDRLNDPFSLY
RCHTIMNCTKTCPKGLNPGLAIAELKKMLATHNSAAVAISQK
Nucleotide sequence
Length: 849
>Phfumi.CG.MTP2014.S21.g00380.01.t
GGGTTTGGGATTTCTCGTACAGTGCTGCGAAAATCGTGCCAAACAGCCGGTCTATTTACT
CAAACTGCAAGATGTGCCGCCTCTGCAGCTGCCGTAGAAAAAGAGCAACCAAGAATTAAA
ACTTTTTCTGTCTATCGTTGGAATCCAGAAGAAAAGAATTCCCAACCATACATGAAAAAA
TATAAAGTTGATTTAAATGATTGCGGTCCTATGGTTCTTGATGCTTTAATCAAGATCAAG
AATGAACAAGACCCAACATTAACATTCCGGCGTTCATGTCGCGAAGGAATTTGCGGATCT
TGTGCGATGAACATTCGTGGAACAAACACCTTAGCTTGCTTATCGCGAATTGATACAAAT
TTGAGCAAACCAACCAAGATCTATCCACTCCCTCACATGTACGTCGTCAAGGATCTCGTC
CCAGATATGGCAAACTTCTATGCCCAATATCGGTCAATTGAACCATTCTTGAAGCAGAAA
GATGTTTCGAAAGCTGGTGTGGAAAATCATCAATCAGTTGAGGACAGACAAAAGTTGGAT
GGCTTGTATGAATGCATCTTGTGTGCGTGTTGTTCCACATCCTGCCCAAGTTACTGGTGG
AATCCAACAAAGTATTTGGGACCTGCAGTTTTGATGCAGGCATACAGATGGATCATCGAC
AGTCGGGATGAATACAGGGCAGAGAGATTAGATCGGCTCAATGACCCCTTCTCATTGTAC
AGATGCCATACAATCATGAATTGCACTAAGACATGTCCAAAGGGACTCAATCCTGGTTTG
GCAATTGCAGAGTTGAAGAAAATGTTGGCAACCCATAATTCTGCAGCAGTTGCAATTTCT
CAAAAATAA
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[28-142] 1.9E-49 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[38-142] 2.49E-29 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[40-133] 9.131 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[41-147] 5.6E-33 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[44-266] 2.0E-83 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[72-121] 0.00179823 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[93-101] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[143-278] 9.3E-61 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[144-271] 1.92E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[175-205] 7.634 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[185-196] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 70.943 % | 408 | 2.93E-145 |
