- Transcript 'KH2012:KH.L153.109.v...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2143.g04548.03.t
Possible name(s)
MYD88; SIGIRR; TLR3
Gene model
Location
S2143 [11,452 / 13,314]
Amino acid sequence
Length: 374
>Phfumi.CG.MTP2014.S2143.g04548.03.p
MSEEKKLQTNNLDDMASIQMQRKEMESFSSGYEKPPLGTPVECDSTDADVPGQSSLGRRT
AGVQESNYDSGKSATSMPTLDASTHLHSPPPSYYNQPEGSWSSGQSSNLEKKDDVNLVAT
YGMGVPSDDYMSMPLRKLRYKTQAVLNECEVRQPNLTIGDLCKILSELGRLDVITDLQEF
FERDYKEPPSISLVSSRFDQSPAPSYRTVEPVQDYAVSSTYFEHPQQSGSERHFPEERYD
AFVLYNIADKDFILKEFLPKVEVEAQLKLFLPERDLTAGVQSYHAKLNTMIGRCSKLIII
LSNEFLTSPESQWALNMGVSLDPASRMQKIIPVIYKTITEPNILGGYNACDRTRVLEDSW
FWNNVIKSLKRGRV
Nucleotide sequence
Length: 1,125
>Phfumi.CG.MTP2014.S2143.g04548.03.t
ATGTCAGAGGAAAAGAAATTACAGACAAATAACTTAGACGACATGGCTTCGATTCAAATG
CAACGCAAGGAAATGGAAAGTTTCTCATCTGGATATGAAAAGCCACCCCTGGGTACCCCA
GTGGAGTGTGACAGCACAGATGCTGATGTTCCTGGTCAATCATCATTAGGCAGGCGTACA
GCTGGTGTGCAAGAAAGTAATTATGACAGTGGCAAATCTGCGACATCTATGCCAACATTG
GATGCAAGCACCCATCTCCACAGTCCCCCACCGTCTTACTACAATCAACCAGAGGGATCA
TGGAGTTCTGGCCAAAGCAGTAACCTCGAGAAGAAGGATGATGTAAACTTAGTTGCAACT
TATGGAATGGGTGTACCATCTGATGACTACATGAGCATGCCGCTAAGGAAGTTAAGGTAT
AAAACCCAGGCTGTTTTGAATGAATGTGAGGTCCGGCAGCCAAATTTGACCATTGGGGAC
CTTTGCAAAATTTTGTCAGAACTTGGTCGCTTGGATGTCATAACTGACTTGCAAGAGTTC
TTTGAGCGTGACTACAAAGAACCCCCTTCAATCTCACTTGTTAGCAGTCGTTTTGATCAA
TCGCCAGCCCCTTCATACAGGACAGTAGAGCCAGTACAAGACTATGCTGTTTCCAGCACA
TATTTTGAACATCCACAACAAAGTGGAAGTGAGAGACACTTTCCTGAAGAAAGATACGAT
GCCTTTGTGTTGTACAACATAGCTGATAAAGATTTCATTCTTAAGGAGTTTTTACCCAAA
GTTGAAGTTGAAGCACAGTTAAAGCTTTTCTTGCCGGAACGTGATCTCACAGCTGGTGTA
CAGTCCTACCATGCCAAACTCAACACAATGATTGGCAGATGTTCAAAGCTGATCATTATA
CTCTCAAATGAATTTCTGACAAGTCCTGAAAGCCAATGGGCTCTGAATATGGGTGTAAGT
CTTGATCCAGCCTCTCGCATGCAAAAAATCATTCCAGTTATCTACAAAACCATAACAGAA
CCAAATATCTTGGGAGGATACAACGCATGTGACAGAACAAGAGTTTTGGAGGACAGCTGG
TTTTGGAACAACGTAATAAAGAGCCTAAAGCGTGGTAGAGTTTGA
| PANTHER |
Myelin_different_resp_MyD88 (IPR017281) - T[139-370] 3.1E-16 |
| SUPERFAMILY |
Toll_tir_struct_dom_sf (IPR035897) - T[230-370] 5.75E-19 |
| ProSiteProfiles |
TIR_dom (IPR000157) - T[237-340] 15.287 |
| SMART |
TIR_dom (IPR000157) - T[238-372] 6.4E-4 |
| Gene3D |
Toll_tir_struct_dom_sf (IPR035897) - T[238-370] 7.7E-24 |
| Pfam |
TIR_dom (IPR000157) - T[248-341] 2.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYD88_HUMAN | 26.991 % | 93.6 | 1.22E-21 |