- Transcript 'KH2012:KH.C9.287.v5....' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2143.g04548.02.t
Possible name(s)
MYD88; SIGIRR; TLR3
Gene model
Location
S2143 [11,452 / 13,314]
Amino acid sequence
Length: 416
>Phfumi.CG.MTP2014.S2143.g04548.02.p
MSEEKKLQTNNLDDMASIQMQRKEMESFSSGYEKPPLGTPVECDSTDADVPGQSSLGRRT
AGVQESNYDSGKSATSMPTLDASTHLHSPPPSYYNQPEGSWSSGQSSNLEKKDDVNLVAT
YGMGVPSDDYMSMPLRKLRYETRRQLGLHLDPERPTVPNWKSVADFLGFSNLQIQNFEQD
RYKTQAVLNECEVRQPNLTIGDLCKILSELGRLDVITDLQEFFERDYKEPPSISLVSSRF
DQSPAPSYRTVEPVQDYAVSSTYFEHPQQSGSERHFPEERYDAFVLYNIADKDFILKEFL
PKVEVEAQLKLFLPERDLTAGVQSYHAKLNTMIGRCSKLIIILSNEFLTSPESQWALNMG
VSLDPASRMQKIIPVIYKTITEPNILGGYNACDRTRVLEDSWFWNNVIKSLKRGRV
Nucleotide sequence
Length: 1,251
>Phfumi.CG.MTP2014.S2143.g04548.02.t
ATGTCAGAGGAAAAGAAATTACAGACAAATAACTTAGACGACATGGCTTCGATTCAAATG
CAACGCAAGGAAATGGAAAGTTTCTCATCTGGATATGAAAAGCCACCCCTGGGTACCCCA
GTGGAGTGTGACAGCACAGATGCTGATGTTCCTGGTCAATCATCATTAGGCAGGCGTACA
GCTGGTGTGCAAGAAAGTAATTATGACAGTGGCAAATCTGCGACATCTATGCCAACATTG
GATGCAAGCACCCATCTCCACAGTCCCCCACCGTCTTACTACAATCAACCAGAGGGATCA
TGGAGTTCTGGCCAAAGCAGTAACCTCGAGAAGAAGGATGATGTAAACTTAGTTGCAACT
TATGGAATGGGTGTACCATCTGATGACTACATGAGCATGCCGCTAAGGAAGTTAAGATAT
GAAACTCGAAGACAATTGGGTTTACATTTGGACCCTGAAAGACCAACTGTCCCCAATTGG
AAGTCTGTGGCTGACTTTTTGGGCTTCAGTAACTTGCAGATCCAAAACTTTGAACAAGAT
CGGTATAAAACCCAGGCTGTTTTGAATGAATGTGAGGTCCGGCAGCCAAATTTGACCATT
GGGGACCTTTGCAAAATTTTGTCAGAACTTGGTCGCTTGGATGTCATAACTGACTTGCAA
GAGTTCTTTGAGCGTGACTACAAAGAACCCCCTTCAATCTCACTTGTTAGCAGTCGTTTT
GATCAATCGCCAGCCCCTTCATACAGGACAGTAGAGCCAGTACAAGACTATGCTGTTTCC
AGCACATATTTTGAACATCCACAACAAAGTGGAAGTGAGAGACACTTTCCTGAAGAAAGA
TACGATGCCTTTGTGTTGTACAACATAGCTGATAAAGATTTCATTCTTAAGGAGTTTTTA
CCCAAAGTTGAAGTTGAAGCACAGTTAAAGCTTTTCTTGCCGGAACGTGATCTCACAGCT
GGTGTACAGTCCTACCATGCCAAACTCAACACAATGATTGGCAGATGTTCAAAGCTGATC
ATTATACTCTCAAATGAATTTCTGACAAGTCCTGAAAGCCAATGGGCTCTGAATATGGGT
GTAAGTCTTGATCCAGCCTCTCGCATGCAAAAAATCATTCCAGTTATCTACAAAACCATA
ACAGAACCAAATATCTTGGGAGGATACAACGCATGTGACAGAACAAGAGTTTTGGAGGAC
AGCTGGTTTTGGAACAACGTAATAAAGAGCCTAAAGCGTGGTAGAGTTTGA
| SUPERFAMILY |
DEATH-like_dom_sf (IPR011029) - T[121-228] 1.18E-16 |
| PANTHER |
Myelin_different_resp_MyD88 (IPR017281) - T[129-412] 2.4E-33 |
| CDD |
MyD88_Death (IPR034249) - T[142-220] 4.23107E-23 |
| Pfam |
Death_domain (IPR000488) - T[144-221] 6.6E-9 |
| ProSiteProfiles |
Death_domain (IPR000488) - T[159-223] 10.471 |
| SUPERFAMILY |
Toll_tir_struct_dom_sf (IPR035897) - T[272-412] 7.32E-19 |
| ProSiteProfiles |
TIR_dom (IPR000157) - T[279-382] 15.287 |
| Gene3D |
Toll_tir_struct_dom_sf (IPR035897) - T[280-412] 9.6E-24 |
| SMART |
TIR_dom (IPR000157) - T[280-414] 6.4E-4 |
| Pfam |
TIR_dom (IPR000157) - T[290-383] 2.5E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYD88_HUMAN | 27.336 % | 117 | 4.47E-30 |