- Clone 'AHC0AAA80YG01' >
- Clone 'cien54884' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2143.g04548.01.t
Possible name(s)
MYD88; SIGIRR; TLR3
Gene model
Location
S2143 [11,452 / 13,308]
Amino acid sequence
Length: 414
>Phfumi.CG.MTP2014.S2143.g04548.01.p
EEKKLQTNNLDDMASIQMQRKEMESFSSGYEKPPLGTPVECDSTDADVPGQSSLGRRTAG
VQESNYDSGKSATSMPTLDASTHLHSPPPSYYNQPEGSWSSGQSSNLEKKDDVNLVATYG
MGVPSDDYMSMPLRKLRYETRRQLGLHLDPERPTVPNWKSVADFLGFSNLQIQNFEQDRY
KTQAVLNECEVRQPNLTIGDLCKILSELGRLDVITDLQEFFERDYKEPPSISLVSSRFDQ
SPAPSYRTVEPVQDYAVSSTYFEHPQQSGSERHFPEERYDAFVLYNIADKDFILKEFLPK
VEVEAQLKLFLPERDLTAGVQSYHAKLNTMIGRCSKLIIILSNEFLTSPESQWALNMGVS
LDPASRMQKIIPVIYKTITEPNILGGYNACDRTRVLEDSWFWNNVIKSLKRGRV
Nucleotide sequence
Length: 1,245
>Phfumi.CG.MTP2014.S2143.g04548.01.t
GAGGAAAAGAAATTACAGACAAATAACTTAGACGACATGGCTTCGATTCAAATGCAACGC
AAGGAAATGGAAAGTTTCTCATCTGGATATGAAAAGCCACCCCTGGGTACCCCAGTGGAG
TGTGACAGCACAGATGCTGATGTTCCTGGTCAATCATCATTAGGCAGGCGTACAGCTGGT
GTGCAAGAAAGTAATTATGACAGTGGCAAATCTGCGACATCTATGCCAACATTGGATGCA
AGCACCCATCTCCACAGTCCCCCACCGTCTTACTACAATCAACCAGAGGGATCATGGAGT
TCTGGCCAAAGCAGTAACCTCGAGAAGAAGGATGATGTAAACTTAGTTGCAACTTATGGA
ATGGGTGTACCATCTGATGACTACATGAGCATGCCGCTAAGGAAGTTAAGATATGAAACT
CGAAGACAATTGGGTTTACATTTGGACCCTGAAAGACCAACTGTCCCCAATTGGAAGTCT
GTGGCTGACTTTTTGGGCTTCAGTAACTTGCAGATCCAAAACTTTGAACAAGATCGGTAT
AAAACCCAGGCTGTTTTGAATGAATGTGAGGTCCGGCAGCCAAATTTGACCATTGGGGAC
CTTTGCAAAATTTTGTCAGAACTTGGTCGCTTGGATGTCATAACTGACTTGCAAGAGTTC
TTTGAGCGTGACTACAAAGAACCCCCTTCAATCTCACTTGTTAGCAGTCGTTTTGATCAA
TCGCCAGCCCCTTCATACAGGACAGTAGAGCCAGTACAAGACTATGCTGTTTCCAGCACA
TATTTTGAACATCCACAACAAAGTGGAAGTGAGAGACACTTTCCTGAAGAAAGATACGAT
GCCTTTGTGTTGTACAACATAGCTGATAAAGATTTCATTCTTAAGGAGTTTTTACCCAAA
GTTGAAGTTGAAGCACAGTTAAAGCTTTTCTTGCCGGAACGTGATCTCACAGCTGGTGTA
CAGTCCTACCATGCCAAACTCAACACAATGATTGGCAGATGTTCAAAGCTGATCATTATA
CTCTCAAATGAATTTCTGACAAGTCCTGAAAGCCAATGGGCTCTGAATATGGGTGTAAGT
CTTGATCCAGCCTCTCGCATGCAAAAAATCATTCCAGTTATCTACAAAACCATAACAGAA
CCAAATATCTTGGGAGGATACAACGCATGTGACAGAACAAGAGTTTTGGAGGACAGCTGG
TTTTGGAACAACGTAATAAAGAGCCTAAAGCGTGGTAGAGTTTGA
| SUPERFAMILY |
DEATH-like_dom_sf (IPR011029) - T[119-226] 1.18E-16 |
| PANTHER |
Myelin_different_resp_MyD88 (IPR017281) - T[127-410] 2.4E-33 |
| CDD |
MyD88_Death (IPR034249) - T[140-218] 4.16097E-23 |
| Pfam |
Death_domain (IPR000488) - T[142-219] 6.5E-9 |
| ProSiteProfiles |
Death_domain (IPR000488) - T[157-221] 10.471 |
| SUPERFAMILY |
Toll_tir_struct_dom_sf (IPR035897) - T[270-410] 7.19E-19 |
| ProSiteProfiles |
TIR_dom (IPR000157) - T[277-380] 15.287 |
| SMART |
TIR_dom (IPR000157) - T[278-412] 6.4E-4 |
| Gene3D |
Toll_tir_struct_dom_sf (IPR035897) - T[278-410] 9.5E-24 |
| Pfam |
TIR_dom (IPR000157) - T[288-381] 2.5E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYD88_HUMAN | 27.336 % | 117 | 4.34E-30 |