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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S34...'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S21312.g09769.01.t

Possible name(s)

CDC40

Location

S21312 [147 / 2,194]

Sequences

Amino acid sequence

Length: 359

>Phfumi.CG.MTP2014.S21312.g09769.01.p
KQPSTHEMEAIASLKNAYADVSDGEASGSSDTDEKTPNEEEMLHLKPLSTNKPISLSVVS
AAPEVISIKDTRGARVVDHISNKVVNYNPTYEEMHAPEQGPANPFKTRQQLAQKNTLAGY
VEEAHFSAFNFENQRRTFHSYGFAIDPSVDPTEPQEKLVVNMTNFDDSDEEVEKEKDKND
EAPEEGEIKEKQPKKKKELEVVVPTDTKTVFEKIKARPQDKRKRVRQNDPEDIEGFLGPW
GGYVDEVKIAKPSEEMQKELDELTSKRQKRGKKPEEKPVEEKTTLHVKDPLDYQGRSYLH
IPQDVGVNLKSDMPPDKCYLPKKLLHTWTGHTKSVSSIKLFPRSGHLLLSTSMDCKVKV

Nucleotide sequence

Length: 1,077

>Phfumi.CG.MTP2014.S21312.g09769.01.t
AAACAACCTAGTACACATGAAATGGAAGCTATAGCATCTTTAAAAAATGCCTATGCGGAT
GTTTCTGATGGGGAAGCATCAGGCTCGTCAGATACCGACGAGAAAACGCCCAACGAAGAA
GAAATGCTGCATCTAAAACCGTTGTCCACAAACAAACCAATTTCACTATCTGTTGTTTCA
GCAGCACCCGAAGTTATTTCTATAAAAGACACAAGGGGGGCAAGAGTTGTTGACCATATA
AGCAACAAAGTAGTCAACTACAATCCAACCTATGAAGAGATGCATGCACCAGAACAGGGG
CCAGCAAACCCATTTAAAACACGACAGCAGCTTGCCCAGAAAAATACCTTAGCCGGTTAT
GTGGAAGAAGCTCACTTCAGTGCATTTAACTTTGAAAACCAGAGAAGAACCTTTCACAGT
TATGGGTTTGCGATTGATCCTTCAGTGGATCCAACTGAACCACAAGAAAAACTAGTTGTC
AACATGACAAACTTTGATGACTCGGACGAGGAAGTTGAGAAAGAAAAAGATAAAAATGAT
GAAGCACCTGAGGAAGGAGAGATAAAAGAAAAGCAGCCAAAAAAGAAGAAAGAGTTGGAG
GTAGTCGTACCAACCGACACCAAGACTGTGTTCGAGAAAATCAAGGCTCGACCCCAAGAT
AAAAGAAAAAGAGTGAGACAAAATGATCCTGAAGATATCGAGGGTTTTCTTGGGCCATGG
GGTGGATATGTGGATGAAGTCAAAATTGCTAAACCTTCAGAGGAAATGCAAAAAGAACTG
GATGAACTCACATCAAAGAGGCAAAAGAGAGGAAAGAAGCCTGAAGAAAAGCCAGTTGAA
GAGAAGACAACATTGCATGTCAAGGATCCACTTGATTATCAGGGTCGTTCCTATCTGCAT
ATCCCACAAGATGTTGGGGTTAACCTGAAATCAGACATGCCCCCAGACAAATGCTATCTC
CCCAAGAAGCTGCTCCATACATGGACTGGTCACACAAAATCAGTATCTTCTATTAAACTT
TTTCCAAGGTCTGGGCATTTACTGTTATCTACATCCATGGATTGTAAAGTTAAGGTG

InterProScan

PANTHER
PRPF17 (IPR032847) - T[29-359] 2.8E-85
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[307-359] 1.4E-8
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[323-359] 1.1E-5
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[328-359] 8.545

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PRP17_HUMAN 50.774 % 301 9.16E-98