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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.99.v1....'
  2. Transcript 'Phfumi.CG.MTP2014.S2...'
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Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2126.g04532.01.t

Possible name(s)

NKX6-1; NKX6-2; NKX6-3

Location

S2126 [7,861 / 10,329]

Sequences

Amino acid sequence

Length: 311

>Phfumi.CG.MTP2014.S2126.g04532.01.p
MDGLNINPLHPAGAPSTIVMEKYGRKKHTRPTFSGQQIFALEKTFEQSKYLAGPERARLA
YSLAMTESQVKVWFQNRRTKWRKRHAAEMASAKKRQDGEITQKMKEMDSAQSQASPSQKC
DDSTNNIATSLESPDYANGVDNYPESHSSAGSYTVSKRGTDNEASDNSDADDSDDKPLQP
DRPSSQEVATEQAQETEPERQFKALLYGGYKLRNELTAGNHPANNMYSTQFSAVCSGDAV
SAHAATLPPFNVGMLSGSKVTAGSSQMCSGPQDNAFSSSSSPMGLSMDSLFPGYATSMSH
GVSGDTIMQKF

Nucleotide sequence

Length: 936

>Phfumi.CG.MTP2014.S2126.g04532.01.t
ATGGATGGCCTAAACATAAATCCATTGCACCCGGCAGGTGCTCCTTCCACCATCGTAATG
GAAAAGTATGGACGCAAAAAGCACACCCGCCCCACGTTTTCCGGGCAGCAGATTTTCGCC
CTCGAGAAGACCTTCGAGCAGAGCAAATACCTGGCAGGGCCGGAACGGGCACGACTCGCC
TACTCTCTGGCGATGACAGAGTCCCAAGTCAAGGTGTGGTTCCAGAACCGGCGAACAAAA
TGGCGCAAGCGTCACGCGGCTGAAATGGCGTCAGCTAAGAAGCGACAGGACGGCGAAATC
ACGCAGAAGATGAAGGAAATGGACAGCGCACAATCGCAAGCTTCTCCCTCGCAAAAATGC
GACGATTCAACCAACAACATTGCAACGTCACTGGAAAGTCCCGACTACGCGAACGGAGTC
GACAACTACCCGGAGTCACATTCTAGTGCAGGATCCTACACAGTTTCGAAACGTGGTACC
GACAATGAGGCGAGCGACAACAGCGACGCCGACGACAGCGACGATAAACCGCTCCAGCCC
GATCGCCCGTCCTCACAAGAGGTCGCCACCGAGCAGGCACAGGAGACGGAGCCGGAACGC
CAGTTCAAGGCCCTGCTCTACGGCGGCTATAAGCTGCGCAATGAACTCACCGCCGGCAAT
CACCCCGCAAACAACATGTACTCTACACAGTTTTCCGCGGTGTGTTCTGGCGACGCTGTG
AGTGCCCACGCGGCCACGCTCCCTCCGTTTAACGTGGGAATGTTGTCGGGCAGCAAAGTT
ACGGCTGGGAGCTCGCAGATGTGCTCCGGTCCGCAGGATAACGCCTTTTCGTCCTCTTCA
TCGCCAATGGGTCTTTCCATGGACTCACTGTTTCCCGGTTACGCCACATCTATGTCGCAC
GGAGTATCGGGTGACACGATCATGCAGAAGTTCTAA

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[11-84] 2.44E-22
ProSiteProfiles
Homeobox_dom (IPR001356) - T[24-84] 19.629
SMART
Homeobox_dom (IPR001356) - T[26-88] 2.1E-21
Pfam
Homeobox_dom (IPR001356) - T[27-83] 2.7E-20
CDD
Homeobox_dom (IPR001356) - T[27-85] 3.19423E-20
PRINTS
Homeobox_metazoa (IPR020479) - T[48-59] 9.5E-6 - T[63-73] 9.5E-6 - T[73-82] 9.5E-6
ProSitePatterns
Homeobox_CS (IPR017970) - T[59-82] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NKX62_HUMAN 80.435 % 158 1.2E-46
NKX61_HUMAN 80.899 % 159 3.02E-46
NKX63_HUMAN 83.824 % 126 1.09E-34