- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2111.g04518.01.t
Possible name(s)
PARN; PNLDC1
Gene model
Location
S2111 [4,271 / 8,091]
Amino acid sequence
Length: 545
>Phfumi.CG.MTP2014.S2111.g04518.01.p
MDVTRDNFRQTLPLVKQAIKEASFIAIDGEFTGLSNGSFNTTAYDSPTQRYLKLHSNTHN
FLLIQFGFDFNKAFKNGIPYLRPNEEATVRSTLEEKQAFRENAFRSPVKRKSNSNNSSPV
STDSPTLTADQKAKDFMETVKQKVQKFLEGANQEEELILESCNSYFRKLLFESLPMAFPD
QILVESRTNEETKMRHIVVVKGASSNIKKARQEQTKAREEAELEDAIGFSKVISCLSESG
KLVVGHNMLLDVIYTIQQFVHPLPNDLDEFKSLLSCVFPKVLDTKLMGSMLPFKDQLQST
ALGDMHNRLKLPPFNPVEVETPGKYNIGTNNEHNNLHEAAYDAFITGSSFLSMVNFLSSF
QSSSTPVISFSSLCNLVSPYVNKAKNVKNLVKSGTVEPSLYHIQSYEEYQAEPKQWFSTC
QRNLVWHSKSTISSTVNTPTRAKPALSFTSGLGQASISSQASDSPTPIYRKRQGSFVNRE
TTNGSSNDCEEGVVEPLVKRQKSQEDCAADPPATYKAGGRDGADVGDMSTAAACSGLFVV
PNQWE
Nucleotide sequence
Length: 1,638
>Phfumi.CG.MTP2014.S2111.g04518.01.t
ATGGATGTAACACGTGACAATTTTAGGCAAACTTTGCCTTTGGTAAAGCAAGCTATTAAA
GAAGCAAGTTTTATAGCAATTGATGGGGAGTTTACTGGTCTTTCCAATGGCTCATTTAAT
ACTACAGCCTATGACTCACCAACACAGAGATACCTAAAGTTGCACAGCAACACTCATAAC
TTTCTGTTGATACAATTTGGTTTTGATTTCAACAAGGCATTTAAAAATGGAATTCCTTAT
TTGCGACCAAATGAAGAAGCCACAGTTCGATCAACTTTAGAAGAGAAGCAAGCATTTCGT
GAAAATGCATTTCGGTCCCCTGTAAAACGTAAGAGTAATTCCAATAATTCCAGTCCAGTT
TCTACTGACAGTCCAACACTTACGGCAGATCAAAAAGCCAAAGATTTCATGGAAACAGTG
AAACAAAAAGTGCAAAAGTTTTTGGAAGGTGCAAATCAAGAGGAGGAACTTATTTTAGAA
TCATGCAATAGTTATTTTAGAAAACTTCTTTTTGAATCTTTGCCTATGGCTTTTCCTGAT
CAAATTCTTGTGGAATCGCGGACCAATGAGGAAACTAAAATGCGTCACATTGTTGTTGTA
AAAGGCGCAAGCTCAAACATAAAAAAGGCTCGTCAAGAGCAAACTAAAGCCAGAGAGGAA
GCTGAACTAGAAGATGCCATTGGATTTTCAAAAGTGATATCATGTCTTAGTGAGAGTGGA
AAATTAGTGGTTGGGCACAACATGTTGTTGGATGTTATTTATACTATTCAGCAATTTGTT
CATCCGTTACCAAATGACCTTGATGAGTTTAAATCCCTTCTCTCCTGTGTCTTTCCTAAA
GTGCTGGACACAAAGTTAATGGGTAGCATGTTGCCATTTAAGGATCAACTACAGTCCACA
GCTTTAGGAGACATGCACAATCGATTAAAACTACCTCCATTTAATCCAGTAGAAGTTGAA
ACACCTGGTAAATACAACATCGGAACAAACAATGAACACAACAACCTTCATGAAGCTGCT
TATGATGCGTTTATTACAGGTTCATCGTTTTTATCAATGGTTAACTTTTTATCTTCATTC
CAATCGTCTTCAACTCCGGTTATATCATTTTCATCTTTGTGCAATTTAGTGTCACCATAT
GTCAACAAGGCCAAAAATGTAAAGAATTTGGTGAAGTCTGGAACTGTGGAACCAAGTTTG
TATCACATTCAGTCATATGAGGAGTACCAGGCAGAACCAAAACAATGGTTTTCCACATGC
CAAAGAAATCTGGTTTGGCATTCCAAGTCAACGATAAGCAGCACCGTAAACACACCCACA
AGGGCTAAACCAGCCCTATCGTTTACCAGTGGACTTGGCCAAGCAAGTATTTCGTCGCAA
GCGTCAGATTCTCCTACACCGATATATAGGAAACGACAAGGCAGTTTTGTAAATCGTGAG
ACAACAAACGGTAGTTCAAATGACTGTGAAGAAGGTGTTGTGGAACCGCTTGTAAAAAGG
CAAAAATCGCAGGAGGATTGTGCAGCAGACCCACCAGCAACCTATAAGGCCGGGGGCAGA
GACGGGGCTGACGTTGGCGACATGTCGACTGCTGCAGCATGTTCTGGCTTGTTTGTTGTT
CCGAATCAGTGGGAGTAA
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[1-362] 1.77E-45 |
| Gene3D |
RNaseH_sf (IPR036397) - T[1-117] 1.5E-21 - T[152-394] 2.3E-52 |
| Pfam |
RNase_CAF1 (IPR006941) - T[67-350] 2.4E-47 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[131-210] 1.04E-11 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[134-203] 9.833 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PARN_HUMAN | 39.14 % | 290 | 1.42E-90 |
| PNDC1_HUMAN | 26.879 % | 98.6 | 8.24E-22 |