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TRANSCRIPT CARD

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  1. Clone 'cicl026g02' > 
  2. Clone 'csga093b01' > 
  3. Clone 'csef039h12' > 
  4. Region 'REG00000663' > 
  5. Transcript 'Phfumi.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S2042.g04439.01.t

Possible name(s)

FOXA2; FOXB1; FOXB2

Gene model

Phfumi.CG.MTP2014.S2042.g04439

Location

S2042 [2,774 / 4,271]

Sequences

Amino acid sequence

Length: 498

>Phfumi.CG.MTP2014.S2042.g04439.01.p
MPRPGRDSYGDQKPPYSYIALTAMAIQSSPNKMMSLSEIYRYIMDRFPFYRKNTQRWQNS
LRHNLSFNDCFVKVPRRGDQPGKGSLWAMHPTCGEMFENGSFLRRRKRFKTEDKAHPSSS
HNYDVMSLNQGMYNNQSAASTAHHVINERGMYNVPALRKFPHYPGYPLPGLQRPQVVPPT
PMFPQMTPGSPASTAAAVAYFQTAMAGYRNAMASLSMRGNPVHPLMRGYGFPQSEAFQRF
LVPRSSADDGVLSAPTRSECDTNSESKSNSFESSRSGLGGNSPLGQNSSGDESNSSERVS
SSKAISFSIENIISGRFSPNSATKQKQTDMGRKRQSSDGPQTPSKKLKLDGETPAKVIDS
SSGKIQNGDPEVSHASPTELRLQCAPRTSTPKPDGSYLPFYLQKRDDQTSPVAPAEAISI
PTSRDKYGGNPGRHQASPTTTTSPVSAASFGYLSQGPVAHGMLQLRQPSNRLTSESKDSP
HAYSAFARLKRFTELQVQ

Nucleotide sequence

Length: 1,497

>Phfumi.CG.MTP2014.S2042.g04439.01.t
ATGCCGAGACCAGGTCGAGACTCGTACGGAGACCAAAAGCCTCCTTATTCATACATCGCG
CTGACGGCCATGGCCATCCAGTCGTCGCCCAACAAAATGATGAGTCTGTCGGAAATTTAC
CGCTACATCATGGACCGTTTTCCGTTCTACCGTAAAAACACCCAGCGCTGGCAGAACTCG
TTACGTCACAACCTTTCCTTCAACGATTGCTTCGTAAAAGTTCCGCGGCGCGGCGACCAA
CCCGGGAAAGGCAGTCTATGGGCAATGCACCCAACCTGCGGGGAGATGTTCGAAAACGGG
AGCTTCCTGCGTCGTCGCAAGCGTTTTAAAACGGAAGATAAAGCACACCCGTCATCGTCG
CACAACTACGACGTAATGTCCTTAAACCAGGGAATGTACAACAACCAATCAGCGGCGAGC
ACGGCACACCACGTGATCAACGAACGAGGAATGTACAACGTTCCAGCTTTAAGGAAATTC
CCCCACTACCCAGGTTACCCCCTACCTGGACTACAGCGCCCCCAAGTCGTTCCCCCGACG
CCGATGTTCCCGCAGATGACGCCGGGCAGCCCAGCCAGCACCGCCGCCGCCGTGGCGTAT
TTCCAAACCGCCATGGCCGGTTACCGAAACGCCATGGCGTCTCTATCGATGCGGGGAAAC
CCCGTTCACCCACTTATGAGGGGTTACGGCTTTCCTCAGTCCGAAGCTTTTCAGCGATTC
CTGGTCCCTCGAAGTTCGGCCGATGACGGCGTTTTATCGGCGCCGACGCGGAGCGAATGC
GACACAAACAGCGAGTCGAAATCCAACTCGTTCGAATCGAGTCGTTCAGGACTCGGCGGC
AATTCGCCACTCGGCCAAAACTCGTCTGGCGACGAGTCGAACTCGAGCGAGCGAGTTTCC
AGTTCCAAAGCGATCAGCTTCTCGATTGAGAACATCATCAGCGGAAGGTTCTCACCGAAC
AGCGCCACCAAGCAGAAGCAAACCGACATGGGGAGAAAGCGACAATCCAGCGACGGACCT
CAGACCCCGAGCAAAAAACTCAAACTCGACGGCGAAACCCCAGCCAAAGTGATCGACAGT
TCCAGCGGCAAAATACAAAATGGCGACCCCGAGGTTTCTCACGCCTCGCCGACGGAACTT
CGCTTGCAGTGCGCCCCGCGGACAAGCACGCCGAAGCCCGATGGTTCGTACCTGCCGTTC
TACCTGCAGAAACGCGACGATCAAACTTCTCCTGTCGCACCGGCGGAAGCGATTTCAATC
CCGACGTCACGTGATAAATATGGCGGTAACCCAGGGCGCCACCAAGCGAGCCCGACGACA
ACGACGTCTCCTGTATCAGCGGCGAGTTTCGGTTATTTGTCGCAGGGGCCGGTCGCGCAC
GGAATGTTGCAATTGCGACAACCAAGTAACCGTCTCACGTCGGAATCAAAAGACTCACCT
CACGCGTATTCGGCGTTCGCTCGTCTCAAGCGTTTCACTGAACTACAAGTCCAGTAA

InterProScan

SMART
Fork_head_dom (IPR001766) - T[11-101] 5.7E-59
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[11-112] 3.6E-44
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[12-107] 9.98E-39
Pfam
Fork_head_dom (IPR001766) - T[12-98] 5.8E-36
ProSiteProfiles
Fork_head_dom (IPR001766) - T[13-107] 38.856
CDD
Fork_head_dom (IPR001766) - T[13-90] 5.17056E-49
ProSitePatterns
TF_fork_head_CS_1 (IPR018122) - T[13-26] .
PRINTS
Fork_head_dom (IPR001766) - T[13-26] 2.3E-22 - T[34-51] 2.3E-22 - T[57-74] 2.3E-22
ProSitePatterns
TF_fork_head_CS_2 (IPR030456) - T[57-63] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FOXA2_HUMAN 68.142 % 180 3.91E-51
FOXB1_HUMAN 76.613 % 221 4.61E-68
FOXB2_HUMAN 75.862 % 207 1.55E-61