- Molecular Tool 'pBra>Onecut/HNF6' >
- Transcript 'Cisavi.CG.ENS81.R37....' >
- Molecular Tool 'cieg14d19-MO (Hamada's MO)' >
- Transcript 'Phfumi.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S2005.g04390.01.t
Possible name(s)
DDX18; DDX31; DDX55
Gene model
Location
S2005 [6,445 / 9,402]
Amino acid sequence
Length: 717
>Phfumi.CG.MTP2014.S2005.g04390.01.p
MTDDLTLNISSTVTAQPWKYRKQHVRGIVSRKKRIEERRKLKKRMLKFGQSQTENTDATK
QVTTNAEVEVSAPKTQKENPTVVKRHFKRDNHGQMVKAKSIFSGNPDIPELDLPKSAHKK
VKKVNPGNKFIDMDIHPGLKSYIVEKMELEQMTPVQAASLPVLLEGQDALIRSQTGSGKT
LAYALSILQTLQAVTPEVTRQSGPMAIVLTPTRELAQQSYAVFQQLTLPVRRIVATWLVG
GQNRKSEKARIRKGVNIIVSTPGRFVDHLENTSCLSLENIKWLVFDEADRLLDMGFQRDI
NKVLKEIKKQSEIKPQTVLLSATLNRGVENLVNLALTSPAKVDVNHAQGLKSDSPNFVDP
STGLEVEKVSLPEKLLQHVVVVPSKLRLVTLFSFIMEKIPSAKILVFLSCRDSVEFHYHI
LQLFLEHYQTAWAKNIFQLHGGMVQKDRTETMVKFKKLKLSLLLCTDVAARGLDIPRVDW
VVQYTSPGSPVDYIHRVGRTARAGQKGNAVLFLTPVEVPYVKLLTSYDIDINQLKLDQIL
TGLLPAKSKKFQENIRIQMAKEKSAETHKTLESFIQEDKKLKEFAVKAFVAFIRAYATYP
LALKHIFHVKNLHTGHVAKSFALQDTPGEALKSLQNTVGHRAVQQMQFKRKQTKSNSKSN
TEQLQKQPDLKQSVPAKIKILPKVTKATKRHPIVAKFDLMSEFSSGMEGITVPKKMK
Nucleotide sequence
Length: 2,151
>Phfumi.CG.MTP2014.S2005.g04390.01.t
ATGACAGATGATTTAACTTTAAATATTTCTTCAACTGTTACTGCTCAGCCGTGGAAATAT
CGCAAGCAACATGTAAGAGGAATAGTTAGCAGAAAGAAGCGCATTGAAGAAAGAAGAAAA
CTTAAAAAGAGAATGCTTAAGTTTGGACAATCCCAAACAGAAAATACAGATGCAACGAAG
CAAGTGACAACAAATGCAGAAGTTGAGGTATCTGCACCGAAAACACAGAAGGAAAACCCA
ACTGTTGTTAAAAGACACTTTAAGCGAGATAATCATGGTCAGATGGTGAAAGCAAAATCA
ATATTCTCTGGTAACCCCGATATTCCAGAATTGGATTTGCCAAAGTCAGCCCATAAAAAG
GTTAAGAAAGTTAATCCTGGTAACAAGTTTATTGATATGGATATACATCCTGGTTTGAAA
TCTTACATTGTTGAAAAAATGGAACTTGAACAAATGACCCCTGTACAAGCTGCTTCCCTG
CCAGTTTTACTAGAAGGACAGGATGCCCTAATAAGATCCCAAACAGGTTCTGGTAAAACA
CTGGCATATGCACTATCTATTTTACAAACTTTGCAGGCAGTGACACCTGAAGTTACGAGA
CAAAGTGGCCCAATGGCAATAGTGCTTACACCAACCAGAGAACTCGCACAGCAAAGTTAT
GCTGTTTTTCAACAACTTACTTTACCTGTTCGAAGGATAGTGGCCACTTGGCTGGTGGGT
GGACAGAATCGCAAGTCGGAGAAGGCTCGTATCAGAAAAGGTGTTAATATAATAGTTTCA
ACACCTGGACGATTTGTGGATCACCTTGAAAACACATCATGTCTCAGCCTTGAGAATATC
AAATGGCTAGTTTTTGATGAAGCTGACCGTTTGCTTGATATGGGATTTCAAAGGGACATT
AATAAAGTTCTCAAAGAGATAAAGAAACAGTCTGAAATCAAACCACAGACCGTTTTACTT
TCAGCCACCCTAAACAGAGGTGTTGAAAACTTGGTTAATTTAGCTTTAACAAGTCCAGCA
AAAGTCGATGTCAATCATGCGCAAGGGTTGAAATCTGACAGTCCAAATTTTGTTGATCCT
TCGACAGGCCTAGAAGTTGAAAAGGTATCATTACCAGAAAAACTGCTGCAACATGTTGTT
GTGGTCCCAAGTAAACTGAGATTAGTTACCCTTTTTTCATTCATAATGGAAAAAATACCT
TCAGCAAAGATTCTTGTATTCCTTTCATGTCGTGACTCTGTTGAATTCCATTATCACATT
CTTCAACTGTTTTTGGAGCATTACCAAACCGCATGGGCAAAAAACATCTTTCAACTTCAC
GGGGGAATGGTGCAGAAGGACAGAACTGAAACTATGGTAAAATTCAAGAAATTAAAACTC
AGTTTGCTGTTGTGCACAGATGTGGCTGCAAGGGGTCTTGATATTCCCAGGGTAGACTGG
GTGGTTCAGTACACAAGTCCGGGCAGTCCAGTTGACTACATACATAGGGTTGGGCGAACT
GCACGTGCTGGACAAAAAGGAAATGCAGTTTTGTTTCTCACTCCTGTTGAAGTTCCCTAT
GTAAAGTTGCTCACAAGTTATGACATTGACATCAATCAGCTTAAGTTGGATCAAATTCTC
ACTGGTTTGCTACCAGCAAAATCCAAAAAGTTTCAGGAAAACATCAGGATTCAGATGGCA
AAAGAAAAATCTGCTGAAACACACAAAACTTTGGAAAGCTTTATACAAGAGGACAAGAAG
CTAAAAGAATTTGCAGTTAAAGCTTTTGTTGCATTCATAAGGGCATATGCCACTTATCCT
CTTGCTCTCAAACATATATTCCATGTGAAAAATCTTCATACTGGACATGTTGCTAAAAGT
TTTGCATTGCAGGATACACCAGGGGAAGCATTGAAAAGTCTGCAAAATACAGTGGGACAC
AGGGCGGTACAACAAATGCAATTCAAAAGAAAGCAAACTAAAAGCAACAGCAAAAGCAAC
ACTGAGCAACTGCAAAAACAACCAGACTTGAAACAGTCAGTCCCTGCTAAGATCAAAATC
TTGCCTAAGGTAACCAAAGCAACCAAGCGACATCCAATTGTTGCTAAGTTTGACCTGATG
TCGGAGTTCAGCAGTGGTATGGAGGGAATCACTGTACCGAAAAAGATGAAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[128-157] 7.363 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[148-367] 5.8E-47 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[153-331] 6.6E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[160-342] 31.383 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[203-522] 7.71E-62 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[284-292] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[374-547] 19.756 |
| CDD |
Helicase_C (IPR001650) - T[376-512] 9.73543E-27 |
| Pfam |
Helicase_C (IPR001650) - T[396-504] 3.8E-23 |
| SMART |
Helicase_C (IPR001650) - T[423-504] 2.0E-25 |
| SMART |
DUF4217 (IPR025313) - T[566-631] 3.3E-25 |
| Pfam |
DUF4217 (IPR025313) - T[568-627] 3.2E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX18_HUMAN | 35.992 % | 272 | 2.41E-81 |
| DDX55_HUMAN | 34.132 % | 240 | 3.79E-70 |
| DDX31_HUMAN | 44.821 % | 469 | 1.91E-154 |