- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1.g00016.02.t
Possible name(s)
VPS36
Gene model
Location
S1 [354,376 / 358,888]
Amino acid sequence
Length: 389
>Phfumi.CG.MTP2014.S1.g00016.02.p
MDRFSWSNGGPLYGEKQILKQNSVRIYDGDEKTSYDEGSLMLTTHQIIWRDSSNFQICIS
LPLYLVVFCEKQSAGIGKSAKLSLHLQATQANRAPGPVSRSRFDYVRFSFKSGGESEFHA
KLQDAIQKKEWESNSSHSTSSPTSRSTSKTGPIRASGIVGIERKIEENRRVTDQNISVAF
QDLTKLMEKAKEMVSLSSNIANKIKDKKGDITDDETVKFKSYLLSLGIPNPVTKETHGSG
THYHMQLAHEIAALLKSPLEENAGIMLLSDAYCRINRARGMELLSPEDLLNACRMLDNLK
LHMKLRQFDTGVLVLQLDSHSDEKVISQTIELVDDSKSLSAQELANLVSVSVLLAKERLL
LAERAGKLCRDDSDEGLRFYPNLFAQPMR
Nucleotide sequence
Length: 1,170
>Phfumi.CG.MTP2014.S1.g00016.02.t
ATGGATCGTTTCTCTTGGTCAAACGGAGGTCCGCTTTATGGAGAGAAACAAATTTTGAAA
CAAAATTCTGTCCGCATTTACGATGGCGATGAAAAGACAAGCTATGACGAAGGTTCTTTG
ATGCTTACAACACATCAAATAATTTGGAGAGATTCATCTAACTTTCAAATTTGTATTTCC
CTCCCATTGTACCTTGTCGTTTTCTGTGAAAAACAATCAGCAGGCATTGGAAAAAGTGCG
AAGCTTAGTCTTCATTTGCAAGCAACACAAGCAAACCGGGCTCCTGGACCTGTTTCAAGG
AGCCGTTTTGATTATGTTAGATTTTCTTTCAAAAGTGGCGGGGAATCTGAATTTCATGCC
AAACTTCAGGATGCTATACAGAAAAAAGAATGGGAAAGCAATTCTTCACACAGCACTTCA
AGCCCAACAAGCAGGAGCACATCAAAGACTGGCCCAATTAGAGCCTCTGGGATTGTTGGA
ATTGAACGAAAAATCGAGGAAAATCGAAGAGTCACTGATCAAAACATTTCAGTTGCATTT
CAAGACTTGACAAAACTGATGGAAAAAGCAAAAGAAATGGTTTCCCTCTCATCAAACATT
GCAAACAAAATCAAGGACAAGAAAGGAGACATCACTGATGATGAGACAGTTAAGTTCAAG
TCCTACCTTCTTAGCTTGGGTATTCCCAACCCTGTGACAAAGGAAACACATGGAAGTGGA
ACTCATTATCACATGCAGTTGGCACATGAGATTGCTGCATTACTTAAATCACCATTGGAA
GAGAATGCAGGAATAATGCTTTTATCCGATGCCTACTGTCGAATTAACAGAGCAAGAGGC
ATGGAGCTCCTGTCTCCTGAGGATCTTCTAAATGCTTGTCGGATGTTGGACAATTTAAAA
CTTCACATGAAGTTGAGACAATTTGACACTGGAGTCTTAGTTCTGCAGCTTGACTCTCAC
AGTGATGAGAAAGTCATCAGCCAAACAATAGAGCTGGTGGACGACAGCAAGAGTTTAAGT
GCTCAAGAACTTGCAAACTTGGTCAGTGTATCAGTTCTGCTAGCAAAAGAGAGGTTACTT
TTAGCGGAGAGAGCTGGCAAATTATGTCGGGATGATTCTGACGAAGGCCTGAGATTCTAT
CCCAACTTGTTTGCTCAACCAATGCGATGA
| ProSiteProfiles |
GLUE_dom (IPR021648) - T[1-138] 20.377 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1-138] 2.8E-46 |
| PANTHER |
Vps36 (IPR037855) - T[13-386] 9.1E-135 |
| Pfam |
GLUE_dom (IPR021648) - T[14-87] 8.6E-15 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[187-312] 1.41E-9 - T[279-385] 8.52E-27 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[239-318] 4.5E-32 - T[319-387] 9.9E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS36_HUMAN | 57.552 % | 471 | 1.97E-166 |
