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TRANSCRIPT CARD

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  1. Clone 'CCAO16123' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S198.g01368.01.t

Possible name(s)

COL14A1; COL6A5; VIT

Gene model

Phfumi.CG.MTP2014.S198.g01368

Location

S198 [2,776 / 13,875]

Sequences

Amino acid sequence

Length: 572

>Phfumi.CG.MTP2014.S198.g01368.01.p
MQGLCGQPGPAGLPGPDGIPGTDGADGARGPQGVQGPRGERGEPGDRGENGVPGEQGFPG
RDGLRGERGPEGPQGERGFKGEKGEPSDVPGRPGIQGNRGEKGDAGADGSDGTDGEQGVP
GVQGSQGRTGPRGPPGELDLAQLRPIIAEIVRELLPAAPAQEPPNTCQEYPVDVTFLVDG
SDSIGRDEFDSVKDWILLAVDRFKPGMRSIPLHVDVVQYSERSRMEVHQNIENNTNEIED
RVRSIDQMRSGTKTYTAIDFVNTEVVPEMRDGSFKILITMTDGDASDDRNEAAINDARAN
FHMMFSVGVGDKVDNEELLDFSSNGHVFNVGDFAALEGIIANIVENTCAGIDAILAEAGE
PVVTTVVPTVPPGRGDDTSPGCIDAMTDLAFIIDGSSSVGMNGFSLLQEFLRNVVSGFHN
VGNDGTQVAMIQYTDKAHLEFDFSQTTNKQAVLDAIDNLAFRSGNTETGEAIEFAHALYN
DIEGSRDSRKVAVVITDGRSQDDVKIPAEELRLAGAKIFAIGVGEAELVELEEIASSPLT
EFIFSVDDYSAIATIQEMLVEKICIAARGTYR

Nucleotide sequence

Length: 2,742

>Phfumi.CG.MTP2014.S198.g01368.01.t
CAGTTCAGCAGCGATATTGAATACCCTGTTCAACTTCAATCATTTGAAGATTACACAAAC
CCAGCATCGTCTAAGAATTTGCTGGCTTCGATCATGGACACGTTAAACTCGTTGCGTTTC
CTCGGCGAAGGTTCCTTTCTTAACAAAGCTCTTAACTCGTCGGTGGAGCATTTCAGCAGC
CAACCTCGACCCGACCCGATCCTGGATGATATTTCTCCTTCCACACCACGAAAGGTACTG
ATTTTAATGACAAACGGAAAAAGTCACCCGGATGTTACAATGGATGACATTGACGCGTCC
ATTACTGCTCTTGCCGAAGCCGGGGTTGTCGTCTACCCTGTGTCTGTCACACGGGAATGC
CACGGCGTTCAAAGTGTTGCGTGGAACGAAGGTCTCTGCCCGGATACTGTTACGCTTAAC
AGCCTGGCCAAAGTGGGAAGGGAAGCTGGGTCAAGCTTCATGGAAATGACGTCACATGAC
ACCCCTACGGAACTCATCAACGCACTGCAGTGCCCTGACTCTCGTCCTGCCCCTATTCTA
GGACCGTCTTGCAACAACTGCACCTGTGAATGCGAGGGAGAGCCTGGCGAGAAAGGCGAA
GTTGGCCCCGAGGGACCACGAGGACTAAAAGGAGAAGAGCAAAGGTTTCTTGTTTAGGGT
GATCGAGGAGAAAAGGGTGATATTGGACCACCGGGTATTGACGGGATTCATGGAGATAAA
GGTGTTGAAGGAGAGAAAGGCGATCAGGGGCTAAAGGGTGAACCTGGCATTGACGGACTT
TGGGGAGACAAGGGCGAAAGGGGCGAAACAGGACCAAAAGGAGAAGTGGGTGACGACGGA
ATACAAGGTCCGAAGGGCAACAAGGGAGACGAAGGTGATGATGGTGAACAGGGTATTGAG
GGTCCCAGGGGTCCTAAAGGAGAAAAGGGAGAAGGCGTCAAGGGAGACAAAGGTGATGAC
GGCATTGATGGTCCGGATGGACCTCAGGGCCCTAAAGGAGATCTAGGACCAGAGGGAGAC
AAGGGAATGCAAGGTCTTTGTGGCCAGCCAGGACCTGCTGGATTACCGGGCCCGGATGGA
ATTCCCGGTACTGATGGAGCTGATGGTGCTCGGGGTCCACAAGGTGTTCAAGGACCAAGA
GGAGAACGTGGAGAGCCAGGCGACAGGGGCGAGAACGGCGTCCCTGGCGAACAAGGCTTC
CCTGGACGGGATGGTCTGCGTGGAGAAAGAGGACCGGAGGGACCACAGGGCGAGCGTGGA
TTCAAAGGAGAGAAGGGTGAACCGTCAGACGTTCCAGGCAGACCAGGCATTCAAGGCAAC
CGTGGTGAAAAGGGTGATGCCGGGGCTGACGGTTCGGATGGAACTGATGGGGAGCAGGGC
GTTCCCGGGGTTCAAGGTTCACAGGGTCGGACAGGTCCCCGCGGGCCGCCAGGCGAACTC
GATCTCGCTCAACTCCGACCAATCATCGCTGAGATTGTGCGGGAACTTTTACCAGCAGCA
CCTGCACAAGAACCGCCAAACACATGTCAGGAATACCCAGTCGACGTTACTTTCCTCGTC
GACGGAAGCGACTCAATCGGTCGAGATGAGTTTGATAGTGTCAAGGACTGGATTCTTCTG
GCTGTGGATCGGTTTAAGCCAGGAATGCGTTCAATCCCTCTACACGTCGACGTTGTTCAG
TACTCGGAACGTAGCCGCATGGAAGTTCATCAAAACATCGAAAACAACACTAACGAAATC
GAAGACCGAGTTAGAAGCATTGACCAGATGCGCTCTGGCACCAAGACTTACACTGCCATT
GATTTTGTCAATACCGAGGTCGTTCCCGAAATGCGTGATGGTTCTTTCAAAATTCTTATC
ACTATGACGGACGGGGATGCCAGTGATGACCGCAACGAAGCCGCCATTAATGATGCAAGG
GCAAATTTCCACATGATGTTTTCTGTTGGCGTTGGCGATAAAGTAGACAACGAAGAGTTG
TTAGATTTCAGCAGTAACGGCCACGTCTTCAATGTTGGTGATTTTGCTGCGTTGGAAGGC
ATTATCGCCAACATTGTGGAAAACACATGTGCTGGTATCGACGCAATACTCGCAGAGGCT
GGAGAGCCCGTGGTGACAACCGTTGTTCCAACCGTACCCCCGGGTCGCGGTGATGATACA
AGCCCGGGATGTATCGACGCCATGACAGACCTGGCCTTCATCATTGACGGCAGTTCATCG
GTGGGAATGAACGGATTTTCCCTCCTGCAAGAATTCCTTAGGAACGTTGTTAGCGGCTTC
CACAACGTTGGTAACGACGGAACACAAGTTGCTATGATTCAGTACACGGACAAAGCACAT
TTGGAGTTCGACTTCTCTCAAACGACCAACAAACAAGCTGTCCTCGATGCAATCGACAAC
CTGGCCTTCAGAAGTGGAAACACTGAGACTGGCGAAGCAATCGAGTTTGCCCACGCCTTG
TACAATGACATCGAAGGCAGTCGGGATTCCAGAAAGGTTGCTGTCGTCATCACTGATGGT
AGAAGCCAAGATGACGTCAAAATCCCCGCAGAAGAACTGCGTCTGGCCGGTGCTAAGATC
TTTGCGATCGGCGTGGGTGAAGCGGAACTCGTTGAACTTGAGGAAATTGCTTCGAGTCCC
TTGACTGAATTCATCTTTAGCGTGGACGACTATAGCGCTATAGCAACTATTCAGGAAATG
CTGGTGGAGAAAATCTGCATTGCTGCAAGGGGCACCTACAGA

InterProScan

Pfam
Collagen (IPR008160) - T[6-57] 5.6E-9 - T[33-86] 2.4E-10 - T[90-136] 1.8E-7
Gene3D
vWFA_dom_sf (IPR036465) - T[159-351] 9.5E-38 - T[386-570] 2.0E-52
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[163-349] 1.08E-36 - T[382-564] 1.93E-49
SMART
VWF_A (IPR002035) - T[171-348] 1.4E-21 - T[386-564] 3.6E-44
ProSiteProfiles
VWF_A (IPR002035) - T[173-343] 23.866 - T[388-563] 30.523
Pfam
VWF_A (IPR002035) - T[173-340] 7.0E-26 - T[388-557] 5.5E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CO6A5_HUMAN 28.465 % 166 2.2E-43
COEA1_HUMAN 42.408 % 155 1.07E-39
VITRN_HUMAN 28.6 % 152 3.34E-39