- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S195.g01355.01.t
Possible name(s)
CDC27
Gene model
Location
S195 [24,329 / 27,283]
Amino acid sequence
Length: 319
>Phfumi.CG.MTP2014.S195.g01355.01.p
SLTFYLMQASDVFEELRTDHPHHVTGLALYSTTLWHLQDSIALSTLAHSLIELDPMSSET
WCSVGNCFSLRHDNESAVKFFSRAVQIDPQYAYAHTLLGHEYAYSDDNERAMACYRKAIH
CDPRHYNAWYGIGSIYYKQENFALAEIHFKKALSINMRSSVLLCHLGIVQHAQKRSTTAL
NTLANALSLEPRNALCKFHRASILFATDRHEEALKELLQLKLIVPKESLVYFLLGKVYKV
LGENHLAMMNFSWALDLDPKGINNHIKEAIDKQQAGDDGKMFDDGAETDNIDDSNNSSGD
LATAMAEDESTEQDSDESL
Nucleotide sequence
Length: 960
>Phfumi.CG.MTP2014.S195.g01355.01.t
AGTTTGACGTTTTACCTGATGCAGGCTTCTGACGTGTTTGAGGAACTGCGCACGGACCAT
CCGCATCACGTGACCGGCCTGGCGCTCTACAGCACCACCTTGTGGCACTTGCAGGACAGC
ATCGCCCTTTCGACGCTTGCGCACAGTCTCATCGAACTTGACCCGATGTCATCCGAAACA
TGGTGTTCTGTTGGAAACTGCTTCTCCCTTCGCCATGACAACGAAAGTGCCGTAAAGTTC
TTCAGTCGAGCTGTCCAGATTGACCCCCAATACGCGTATGCCCACACCTTGCTCGGTCAT
GAGTATGCTTATAGTGACGACAATGAGCGAGCGATGGCGTGTTACCGGAAAGCTATCCAC
TGCGACCCAAGGCACTATAACGCGTGGTATGGCATCGGCTCAATTTATTACAAGCAGGAA
AACTTTGCGTTAGCTGAAATTCACTTTAAAAAAGCACTTTCCATCAACATGAGAAGTTCG
GTGCTGCTATGCCATCTTGGAATCGTTCAACATGCACAGAAACGATCGACAACGGCATTG
AACACCCTTGCTAACGCGCTATCCCTGGAACCACGCAATGCGCTGTGTAAATTCCATCGA
GCAAGTATTTTATTCGCCACCGATCGCCACGAGGAGGCGCTAAAGGAACTGCTCCAGTTA
AAGTTGATCGTTCCGAAAGAAAGTCTCGTCTATTTTCTACTCGGCAAGGTATACAAAGTT
CTGGGTGAAAACCATCTCGCCATGATGAACTTCTCGTGGGCGCTCGACCTCGATCCCAAA
GGAATCAACAATCATATTAAGGAGGCGATCGATAAACAGCAGGCGGGCGACGACGGCAAG
ATGTTCGATGATGGAGCCGAAACCGACAATATCGACGATTCCAATAATAGTTCAGGCGAC
TTGGCGACTGCGATGGCAGAAGACGAATCGACAGAACAGGACAGCGATGAAAGTTTGTAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[23-155] 1.4E-49 - T[156-259] 1.3E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[57-262] 3.67E-39 |
| SMART |
TPR_repeat (IPR019734) - T[58-91] 9.9E-4 - T[92-125] 0.001 - T[126-159] 6.0E-4 - T[160-193] 3.2 - T[194-227] 220.0 - T[228-261] 0.65 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[58-91] 10.974 - T[92-125] 10.384 - T[126-159] 9.971 - T[160-193] 7.759 - T[228-261] 10.178 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[58-261] 40.554 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 35 % | 106 | 1.26E-25 |
| CDC27_HUMAN | 58.562 % | 383 | 1.22E-127 |
