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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1923.g04289.02.t

Possible name(s)

RDH11; RDH12; RDH14

Gene model

Phfumi.CG.MTP2014.S1923.g04289

Location

S1923 [4,745 / 6,598]

Sequences

Amino acid sequence

Length: 184

>Phfumi.CG.MTP2014.S1923.g04289.02.p
MSSLPKPVSANGSWVKCDVKLPGKTVIITGANTGIGYWTAVDLAKREAKVIIACRNAEKA
QEARVKIVEDAKCPDENVIVKSLNLSSFASIRKFAEDINATEEKLDILINNAGTGVTVNS
VHPGSVRTDLQRHLDAPGNFMWKTLIKINRWLTSWKTAEHGAQTSIYCAIAPELADVTGR
YFRY

Nucleotide sequence

Length: 552

>Phfumi.CG.MTP2014.S1923.g04289.02.t
ATGAGTTCACTTCCGAAACCAGTTAGTGCTAATGGAAGCTGGGTTAAGTGTGATGTAAAG
TTGCCAGGAAAAACTGTAATAATAACTGGAGCGAACACCGGAATCGGTTACTGGACAGCG
GTTGATCTTGCAAAACGCGAAGCAAAAGTGATCATTGCTTGTCGGAATGCTGAAAAGGCA
CAGGAAGCTAGAGTTAAGATAGTGGAAGATGCAAAATGCCCAGATGAAAACGTTATTGTG
AAAAGCCTCAACCTGTCAAGTTTTGCCTCAATAAGAAAGTTTGCTGAAGATATAAATGCT
ACTGAAGAGAAGCTTGACATACTCATCAATAATGCAGGTACTGGAGTAACTGTAAACAGT
GTCCATCCAGGCTCCGTGAGGACCGACTTACAAAGACATCTTGACGCACCTGGGAACTTT
ATGTGGAAAACTCTTATCAAAATTAATCGCTGGCTGACAAGTTGGAAAACTGCTGAACAT
GGGGCACAGACTTCAATTTACTGTGCTATTGCACCTGAGTTGGCTGATGTAACTGGAAGA
TATTTCAGGTAT

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[20-183] 4.45E-29
Pfam
SDR_fam (IPR002347) - T[24-114] 1.6E-15
PRINTS
SDR_fam (IPR002347) - T[25-42] 2.3E-6 - T[103-114] 2.3E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 48.421 % 87.4 5.37E-21
RDH13_HUMAN 50.538 % 90.1 8.52E-22
RDH12_HUMAN 51.961 % 95.5 6.72E-24