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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1923.g04289.01.t

Possible name(s)

RDH11; RDH12; RDH14

Gene model

Phfumi.CG.MTP2014.S1923.g04289

Location

S1923 [3,902 / 6,598]

Sequences

Amino acid sequence

Length: 308

>Phfumi.CG.MTP2014.S1923.g04289.01.p
MSSLPKPVSANGSWVKCDVKLPGKTVIITGANTGIGYWTAVDLAKREAKVIIACRNAEKA
QEARVKIVEDAKCPDENVIVKSLNLSSFASIRKFAEDINATEEKLDILINNAGVMLCPEG
KTEDGFETQFGVNHLGHFLLTNLLLDLVKKSAPSRIVVLSSLAHKYGSINFDNLNSTNNY
DGWAAYGQSKLANILFCRHLAKQLEGTGVTVNSVHPGSVRTDLQRHLDAPGNFMWKTLIK
INRWLTSWKTAEHGAQTSIYCAIAPELADVTGRYFSDCHVENESNAAKNEADAEKLWNVS
VEMTKLNA

Nucleotide sequence

Length: 927

>Phfumi.CG.MTP2014.S1923.g04289.01.t
ATGAGTTCACTTCCGAAACCAGTTAGTGCTAATGGAAGCTGGGTTAAGTGTGATGTAAAG
TTGCCAGGAAAAACTGTAATAATAACTGGAGCGAACACCGGAATCGGTTACTGGACAGCG
GTTGATCTTGCAAAACGCGAAGCAAAAGTGATCATTGCTTGTCGGAATGCTGAAAAGGCA
CAGGAAGCTAGAGTTAAGATAGTGGAAGATGCAAAATGCCCAGATGAAAACGTTATTGTG
AAAAGCCTCAACCTGTCAAGTTTTGCCTCAATAAGAAAGTTTGCTGAAGATATAAATGCT
ACTGAAGAGAAGCTTGACATACTCATCAATAATGCAGGAGTGATGTTGTGTCCGGAAGGC
AAGACTGAAGATGGATTTGAAACACAATTTGGTGTTAACCATCTTGGACATTTTCTTCTC
ACAAATTTGTTGTTAGACTTAGTTAAGAAAAGTGCTCCCAGTCGAATTGTGGTACTCAGC
TCTCTTGCACATAAGTATGGTTCAATCAACTTTGATAACTTAAATTCTACCAACAACTAT
GATGGATGGGCTGCTTACGGACAGAGCAAATTGGCAAATATTCTGTTTTGCAGACACTTG
GCAAAACAGTTGGAAGGTACTGGAGTAACTGTAAACAGTGTCCATCCAGGCTCCGTGAGG
ACCGACTTACAAAGACATCTTGACGCACCTGGGAACTTTATGTGGAAAACTCTTATCAAA
ATTAATCGCTGGCTGACAAGTTGGAAAACTGCTGAACATGGGGCACAGACTTCAATTTAC
TGTGCTATTGCACCTGAGTTGGCTGATGTAACTGGAAGATATTTCAGTGATTGTCATGTT
GAAAATGAGTCAAATGCTGCCAAGAATGAAGCTGATGCAGAGAAGTTGTGGAATGTCAGC
GTTGAAATGACAAAACTGAATGCATGA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-280] 6.51E-62
Pfam
SDR_fam (IPR002347) - T[24-227] 1.9E-34
PRINTS
SDR_fam (IPR002347) - T[25-42] 3.9E-19 - T[103-114] 3.9E-19 - T[148-164] 3.9E-19 - T[186-205] 3.9E-19 - T[207-224] 3.9E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 50.69 % 262 8.03E-87
RDH14_HUMAN 52.203 % 276 6.44E-92
RDH12_HUMAN 52.055 % 268 2.83E-89