Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S18.g00333.04.t

Possible name(s)

RPS3A

Gene model

Phfumi.CG.MTP2014.S18.g00333

Location

S18 [70,543 / 73,204]

Sequences

Amino acid sequence

Length: 230

>Phfumi.CG.MTP2014.S18.g00333.04.p
FFFDKWANMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAMFKHRQIGKTLVSRT
VGTKIAADGLRGRVFECNQADLHGDESTYRKMRLIVEDIQGKHCLTNFHGMLLTRDKLCS
MIKKWQTLIEASVDVSTTDGYKMRMFCIGFTHKRNNQIKKTSYAQHAQVMNIRAKMVEIM
TREVTMGDLRDLVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKILKKPK

Nucleotide sequence

Length: 690

>Phfumi.CG.MTP2014.S18.g00333.04.t
TTCTTTTTCGATAAGTGGGCTAACATGGCTGTAGGAAAGAATAAGCGCCTTACGAAAGGA
GGCAAAAAGGGTGGAAAGAAGAAGATCGTCGATCCGTTCTCCAAGAAGGATTGGTACGAT
GTGAAGGCCCCTGCTATGTTCAAGCACCGCCAAATTGGCAAAACTTTGGTGTCTAGGACT
GTTGGAACCAAAATTGCTGCTGATGGTTTAAGGGGACGTGTCTTCGAATGCAACCAGGCT
GATCTTCATGGCGATGAGTCAACATACAGAAAGATGCGCTTGATTGTGGAGGATATTCAG
GGCAAACATTGCCTCACAAACTTCCATGGTATGCTTCTTACAAGAGACAAGTTGTGCTCG
ATGATTAAGAAGTGGCAGACCCTGATTGAAGCATCGGTGGATGTTTCCACCACTGATGGG
TACAAGATGAGAATGTTTTGCATTGGTTTCACACACAAGCGCAACAACCAAATCAAGAAG
ACCTCCTATGCTCAGCATGCACAGGTCATGAACATTCGTGCAAAAATGGTGGAAATAATG
ACTCGGGAAGTTACCATGGGTGACCTGCGTGACCTTGTCAACAAACTTATCCCGGATTCC
ATTGCCAAAGACATTGAGAAGGCCTGCCAGGGAATCTACCCTCTGCATGATGTGCATATT
CGCAAAGTGAAGATTCTCAAGAAACCAAAG

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[9-230] 33.694
SMART	Ribosomal_S3Ae (IPR001593) - T[24-229] 3.5E-134
Pfam	Ribosomal_S3Ae (IPR001593) - T[24-229] 6.0E-91

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	77.477 %	345	1.72E-121