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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S18.g00333.03.t

Possible name(s)

RPS3A

Location

S18 [69,586 / 73,186]

Sequences

Amino acid sequence

Length: 238

>Phfumi.CG.MTP2014.S18.g00333.03.p
ANMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAMFKHRQIGKTLVSRTVGTKIA
ADGLRGRVFECNQADLHGDESTYRKMRLIVEDIQGKHCLTNFHGMLLTRDKLCSMIKKWQ
TLIEASVDVSTTDGYKMRMFCIGFTHKRNNQIKKTSYAQHAQVMNIRAKMVEIMTREVTM
GDLRDLVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKILKKPKLDIGRLMEMHGEGS

Nucleotide sequence

Length: 714

>Phfumi.CG.MTP2014.S18.g00333.03.t
GCTAACATGGCTGTAGGAAAGAATAAGCGCCTTACGAAAGGAGGCAAAAAGGGTGGAAAG
AAGAAGATCGTCGATCCGTTCTCCAAGAAGGATTGGTACGATGTGAAGGCCCCTGCTATG
TTCAAGCACCGCCAAATTGGCAAAACTTTGGTGTCTAGGACTGTTGGAACCAAAATTGCT
GCTGATGGTTTAAGGGGACGTGTCTTCGAATGCAACCAGGCTGATCTTCATGGCGATGAG
TCAACATACAGAAAGATGCGCTTGATTGTGGAGGATATTCAGGGCAAACATTGCCTCACA
AACTTCCATGGTATGCTTCTTACAAGAGACAAGTTGTGCTCGATGATTAAGAAGTGGCAG
ACCCTGATTGAAGCATCGGTGGATGTTTCCACCACTGATGGGTACAAGATGAGAATGTTT
TGCATTGGTTTCACACACAAGCGCAACAACCAAATCAAGAAGACCTCCTATGCTCAGCAT
GCACAGGTCATGAACATTCGTGCAAAAATGGTGGAAATAATGACTCGGGAAGTTACCATG
GGTGACCTGCGTGACCTTGTCAACAAACTTATCCCGGATTCCATTGCCAAAGACATTGAG
AAGGCCTGCCAGGGAATCTACCCTCTGCATGATGTGCATATTCGCAAAGTGAAGATTCTC
AAGAAACCAAAGCTTGACATTGGTCGGCTGATGGAAATGCATGGAGAAGGCAGC

InterProScan

Hamap
Ribosomal_S1/3_euk (IPR027500) - T[3-238] 37.105
Pfam
Ribosomal_S3Ae (IPR001593) - T[18-223] 6.8E-91
SMART
Ribosomal_S3Ae (IPR001593) - T[18-223] 3.5E-134

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS3A_HUMAN 76.695 % 370 3.36E-131