Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S18.g00333.02.t

Possible name(s)

RPS3A

Gene model

Phfumi.CG.MTP2014.S18.g00333

Location

S18 [69,487 / 73,189]

Sequences

Amino acid sequence

Length: 271

>Phfumi.CG.MTP2014.S18.g00333.02.p
WANMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAMFKHRQIGKTLVSRTVGTKI
AADGLRGRVFECNQADLHGDESTYRKMRLIVEDIQGKHCLTNFHGMLLTRDKLCSMIKKW
QTLIEASVDVSTTDGYKMRMFCIGFTHKRNNQIKKTSYAQHAQVMNIRAKMVEIMTREVT
MGDLRDLVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKILKKPKLDIGRLMEMHGEGSS
KSAPTKSGDDTGSKVDRAVGDSYEPPVQASV

Nucleotide sequence

Length: 816

>Phfumi.CG.MTP2014.S18.g00333.02.t
TGGGCTAACATGGCTGTAGGAAAGAATAAGCGCCTTACGAAAGGAGGCAAAAAGGGTGGA
AAGAAGAAGATCGTCGATCCGTTCTCCAAGAAGGATTGGTACGATGTGAAGGCCCCTGCT
ATGTTCAAGCACCGCCAAATTGGCAAAACTTTGGTGTCTAGGACTGTTGGAACCAAAATT
GCTGCTGATGGTTTAAGGGGACGTGTCTTCGAATGCAACCAGGCTGATCTTCATGGCGAT
GAGTCAACATACAGAAAGATGCGCTTGATTGTGGAGGATATTCAGGGCAAACATTGCCTC
ACAAACTTCCATGGTATGCTTCTTACAAGAGACAAGTTGTGCTCGATGATTAAGAAGTGG
CAGACCCTGATTGAAGCATCGGTGGATGTTTCCACCACTGATGGGTACAAGATGAGAATG
TTTTGCATTGGTTTCACACACAAGCGCAACAACCAAATCAAGAAGACCTCCTATGCTCAG
CATGCACAGGTCATGAACATTCGTGCAAAAATGGTGGAAATAATGACTCGGGAAGTTACC
ATGGGTGACCTGCGTGACCTTGTCAACAAACTTATCCCGGATTCCATTGCCAAAGACATT
GAGAAGGCCTGCCAGGGAATCTACCCTCTGCATGATGTGCATATTCGCAAAGTGAAGATT
CTCAAGAAACCAAAGCTTGACATTGGTCGGCTGATGGAAATGCATGGAGAAGGCAGCAGC
AAATCAGCACCCACAAAGAGTGGCGACGACACAGGATCCAAGGTTGATCGCGCAGTCGGT
GACAGCTATGAACCTCCAGTCCAAGCATCGGTATAA

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[4-271] 39.659
Pfam	Ribosomal_S3Ae (IPR001593) - T[19-224] 1.1E-90
SMART	Ribosomal_S3Ae (IPR001593) - T[19-224] 3.5E-134

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	74.627 %	400	1.12E-142