- Clone 'AHC0AAA192YL02' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1804.g04136.01.t
Possible name(s)
EED; LRWD1; OMD
Gene model
Location
S1804 [11,835 / 13,752]
Amino acid sequence
Length: 639
>Phfumi.CG.MTP2014.S1804.g04136.01.p
RQWNGKLDEDYLLATTEKKSLDEIEDLNLSNLGLHETDLHEDVFNKLTGLIELNLCQNKL
TSIPQNIDIPNLQYLDISENSIKGIDWVEKFPNLIELDIDGNSLLTIDDNYKATYLLKNL
QFIDGKRIDNREKFGTHYTQGLILQMEKLWSSLDLTHATKTLGKELLIKEFTLKSKEKVK
HGPNSLKEYRQWRINQLAPEFVLFKLECPVQSFLENYVKMFASEKPNQVVKRKVNSNTTT
TSPKLPKLSTPNQDMSYLVSSILQCHSGPSGCQDFSTQVWCCEFEPNKHDKHETTNIVAT
CGGENVCIIDCEMTKVQARFHQPNEEFFTLAWTTMSLGTNPSNILAAGGCLGFIHLIHPD
QDTCYSRIKIHSSPIQTMVFSPTGSTHLLSADRKCKIFLLDIDTPTIPDYKISWRKLISF
DGIRATPLKLLVPDAGFSLLCATEFGLYVWKTNGFMKNCNKTVKSVCEITFPFVSPDIRI
VDGLSAISPGMIVSKCAQQGVIFVWNFFTIENNISKAIHSGKEKVSVKILAELKWSVTKH
CYLNLACCEKRNQVVAGDEKGNLWLYDVKTLIQSKRAACFPVPELVTDPTNVIAFPSCTY
NGLKIPELRNGTIFNDVCVSIDGKYIVVAADNNLILIYK
Nucleotide sequence
Length: 1,917
>Phfumi.CG.MTP2014.S1804.g04136.01.t
CGACAGTGGAACGGCAAATTGGATGAAGATTATTTGCTTGCAACGACAGAAAAGAAGAGC
CTTGATGAAATTGAGGATTTAAATCTTAGCAACTTGGGTTTGCATGAAACAGATTTGCAT
GAGGATGTTTTTAATAAGTTGACTGGATTGATCGAACTTAATCTTTGTCAAAATAAACTG
ACATCTATTCCACAAAACATTGACATTCCCAATCTTCAATACTTGGATATCTCTGAAAAT
TCTATCAAAGGGATCGACTGGGTTGAGAAATTTCCAAACCTGATTGAACTCGACATTGAT
GGAAATTCGTTACTCACAATTGATGATAATTACAAAGCAACTTATCTGCTTAAAAATCTT
CAGTTTATTGATGGAAAACGAATTGACAATCGAGAAAAATTTGGTACTCATTATACCCAG
GGTCTTATTTTACAAATGGAAAAATTATGGAGTTCCCTTGATCTTACACATGCCACCAAA
ACTTTGGGCAAAGAACTCTTGATAAAGGAATTTACATTGAAATCAAAAGAAAAAGTTAAA
CATGGACCAAATTCATTGAAAGAATACCGCCAGTGGAGAATTAATCAATTAGCACCAGAA
TTTGTTTTGTTCAAGCTAGAATGCCCTGTGCAAAGTTTTTTGGAAAACTATGTCAAAATG
TTTGCCAGTGAAAAACCTAACCAAGTTGTAAAACGCAAAGTAAACAGCAATACCACAACA
ACAAGTCCGAAACTGCCAAAACTATCGACTCCAAACCAGGATATGTCATACCTTGTTTCA
TCAATCTTGCAGTGCCACAGTGGGCCGAGTGGTTGCCAGGATTTCTCCACACAGGTCTGG
TGTTGTGAATTTGAGCCCAACAAACATGACAAGCATGAAACAACCAACATTGTTGCCACT
TGTGGCGGTGAAAATGTCTGTATAATTGATTGTGAGATGACTAAAGTCCAAGCCCGGTTT
CATCAACCCAATGAGGAATTCTTTACACTTGCATGGACAACAATGTCACTTGGCACAAAT
CCAAGTAACATTTTGGCAGCTGGTGGATGTCTTGGCTTTATTCATTTAATTCATCCCGAC
CAAGATACTTGTTATAGCCGAATCAAAATTCATTCATCACCAATTCAGACCATGGTTTTT
TCACCAACAGGGTCAACACATTTATTGTCTGCTGATCGCAAATGCAAAATTTTCTTGCTG
GATATTGACACACCAACAATTCCAGACTATAAAATTTCATGGAGGAAATTAATCAGTTTT
GATGGAATTCGAGCCACACCACTAAAGTTATTGGTACCGGATGCAGGTTTTTCTCTACTT
TGTGCCACAGAATTCGGCTTGTATGTTTGGAAAACAAATGGTTTCATGAAAAACTGCAAC
AAAACTGTGAAATCGGTTTGTGAAATAACATTTCCATTTGTAAGTCCTGATATCAGAATC
GTTGATGGTTTGTCAGCAATATCACCTGGTATGATTGTGTCAAAATGTGCCCAGCAGGGT
GTTATATTTGTCTGGAATTTCTTTACTATAGAAAATAACATATCAAAAGCGATTCATAGC
GGAAAAGAAAAGGTTTCTGTAAAAATTCTTGCAGAATTAAAGTGGTCTGTCACGAAACAT
TGTTATCTTAATTTAGCTTGCTGTGAAAAACGAAATCAAGTTGTGGCTGGTGATGAAAAA
GGAAATCTTTGGTTGTATGATGTGAAAACTTTGATACAAAGTAAACGTGCTGCTTGTTTT
CCTGTGCCTGAACTTGTTACTGATCCTACAAATGTTATTGCTTTTCCCTCCTGTACATAT
AATGGTCTTAAGATACCAGAACTGCGAAATGGAACAATTTTTAATGATGTTTGTGTGAGT
ATAGATGGAAAATACATTGTTGTGGCTGCAGACAACAATCTGATTTTGATTTACAAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[12-140] 1.2E-18 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[49-70] 6.849 - T[71-92] 7.342 - T[93-114] 6.087 |
| Pfam |
Leu-rich_rpt_4 (IPR025875) - T[70-108] 1.2E-7 |
| SMART |
WD40_repeat (IPR001680) - T[256-310] 35.0 - T[313-358] 400.0 - T[361-401] 0.027 - T[530-567] 300.0 - T[601-639] 24.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[270-639] 1.4E-44 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[275-639] 8.63E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRWD1_HUMAN | 29.552 % | 278 | 1.12E-84 |