- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Molecular Tool 'pFOG::Ci-noggin' >
- Transcript 'KH2012:KH.L119.19.v1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1623.g03939.01.t
Possible name(s)
CAPS; CAPS2; CAPSL
Gene model
Location
S1623 [18,816 / 22,904]
Amino acid sequence
Length: 409
>Phfumi.CG.MTP2014.S1623.g03939.01.p
SVQIKSPPKKGEYWYLDDHLKPKAPSPEPEETGYTIDELAQMQAENTSQPYTGLHGARKS
AAEDDLAKKQKEEIMEQVLVDQLSRHVISDVEQDRDPARQNPADPSSMYNTAPIRFRSRR
LHDTNNNKALPVIERGKYSHVTGRRKGKKYGAEDIQVGKNLSFNTANQPSLPDTMKRSPS
ILFRIYETSSSSSSASAGWDIPSSDRDGGSDTALERRDRKITSEVQRFVRNKLQDRSVSV
LVGMGRMFRSLDTSGDGLLSKDELYAALQEFDIRLPNQDFEAVWRVVDENNDGAIDYGEF
MRAFIGEMNEVRKQIVRKVFKKLDPHKSGFANLLDLQKLYSAKRHPLVVAGNYTQAEMEE
QFVTSVADVTGSRDGRISYLEFVDYYEGLSLAMRSDDDFVNMMRNCWGV
Nucleotide sequence
Length: 1,230
>Phfumi.CG.MTP2014.S1623.g03939.01.t
TCAGTTCAGATCAAATCTCCACCCAAGAAGGGAGAGTACTGGTACCTTGACGACCATCTC
AAACCAAAAGCACCATCCCCAGAGCCTGAAGAAACTGGATATACAATTGATGAACTGGCA
CAAATGCAAGCTGAAAACACTAGCCAACCTTATACTGGACTTCATGGTGCAAGAAAAAGT
GCAGCGGAGGATGACTTGGCCAAAAAGCAGAAAGAGGAAATAATGGAGCAAGTTTTGGTT
GACCAACTTTCACGTCATGTGATAAGCGATGTAGAACAAGATCGAGATCCAGCACGACAA
AACCCAGCTGATCCATCCTCCATGTATAACACTGCCCCTATTCGATTCAGATCGAGACGT
CTTCATGACACCAACAATAACAAAGCACTCCCAGTTATTGAGCGTGGAAAGTACAGCCAC
GTAACAGGAAGAAGGAAGGGAAAGAAATACGGTGCAGAAGATATTCAGGTTGGAAAAAAC
CTAAGCTTCAATACTGCAAACCAGCCAAGCCTACCAGACACAATGAAGAGAAGTCCTTCC
ATTCTTTTCCGAATATACGAGACAAGTTCTTCTTCATCCTCCGCCTCTGCTGGTTGGGAC
ATCCCCTCTAGTGACAGAGACGGAGGATCAGACACTGCTCTGGAGAGGAGAGACAGGAAG
ATCACCAGTGAAGTACAAAGGTTTGTTCGAAACAAGTTGCAGGATCGAAGTGTCAGTGTC
TTGGTGGGAATGGGAAGAATGTTTCGCTCATTGGATACAAGCGGTGATGGGCTTCTTAGT
AAGGATGAGCTCTACGCCGCCTTGCAAGAATTTGATATTCGCTTGCCAAACCAAGATTTC
GAGGCTGTTTGGCGAGTGGTGGATGAGAACAACGACGGAGCAATCGACTACGGCGAATTC
ATGCGCGCATTTATTGGCGAAATGAACGAAGTGCGCAAACAGATTGTTCGCAAGGTTTTT
AAGAAGCTCGATCCGCACAAATCGGGTTTCGCCAACCTCCTCGATCTGCAAAAACTTTAC
AGCGCAAAACGTCATCCGCTAGTGGTCGCAGGTAACTACACCCAAGCCGAGATGGAAGAG
CAATTTGTGACGTCAGTTGCTGACGTCACCGGGTCACGTGACGGGCGTATATCGTACTTG
GAGTTTGTGGATTATTACGAGGGGCTGAGTCTTGCGATGAGGAGCGACGACGATTTTGTG
AACATGATGAGAAACTGTTGGGGGGTATGA
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[239-274] 10.022 - T[275-310] 12.17 - T[311-346] 7.791 - T[373-392] 6.563 |
| SMART |
EF_hand_dom (IPR002048) - T[243-271] 0.16 - T[279-307] 0.0063 - T[315-343] 110.0 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[245-407] 3.18E-29 |
| CDD |
EF_hand_dom (IPR002048) - T[246-304] 2.04734E-12 |
| Pfam |
EF_hand_dom (IPR002048) - T[247-266] 0.0017 - T[281-340] 1.0E-8 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[252-264] . - T[288-300] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAPSL_HUMAN | 28.796 % | 95.5 | 6.07E-23 |
| CAYP1_HUMAN | 33.52 % | 113 | 1.37E-29 |
| CAYP2_HUMAN | 32.361 % | 186 | 1.93E-53 |