Aniseed - Transcript Card

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Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1599.g03918.03.t

Possible name(s)

EIF3M; PSMD13

Gene model

Phfumi.CG.MTP2014.S1599.g03918

Location

S1599 [4,191 / 8,045]

Sequences

Amino acid sequence

Length: 299

>Phfumi.CG.MTP2014.S1599.g03918.03.p
SIINATSKIWNETDPKDIEGIVNSILSLLFIIPLNQGKELVDLLCGQLLAGASEAGKNAL
SMKLLHNLFHGYQIKTPFLYNVYCTWIKVAGLSGSLHLLPTDLKEVNTWLEFWDAGESGR
QNLYRLLYQGQYKCGKSDEAAETMIRLLEGYTDDNAAQAREDAIKCITRAITDQNTYLFD
QLLTLKPVKFLEGELIYDLLNIFVSGNVNDYKEFYAANKKFFQNLGLSHESNLRKIQLLT
LVDIVGVSREIGFDEIVNKLGLSHSEVEDFIIDAIQSKLIRARIDHVNRKILVSQACQR

Nucleotide sequence

Length: 897

>Phfumi.CG.MTP2014.S1599.g03918.03.t
TCCATTATTAATGCCACATCAAAAATATGGAATGAGACCGATCCTAAAGATATTGAAGGA
ATTGTCAACAGCATTTTGTCCCTTCTGTTTATCATACCATTGAATCAAGGCAAGGAATTG
GTCGATTTATTATGTGGACAACTTCTTGCTGGTGCTTCAGAAGCTGGGAAGAATGCTCTT
AGCATGAAACTATTGCATAACCTTTTTCATGGTTACCAAATAAAAACTCCTTTTCTTTAC
AACGTGTACTGCACATGGATTAAAGTAGCAGGCCTTTCAGGGAGTCTTCATCTACTACCA
ACCGATCTAAAAGAGGTGAACACTTGGCTTGAATTCTGGGACGCTGGTGAAAGTGGTCGG
CAAAATTTGTACCGGTTGTTATACCAAGGTCAATACAAGTGCGGAAAATCTGACGAAGCG
GCTGAGACTATGATACGACTGCTCGAAGGTTATACTGACGACAATGCTGCACAAGCCAGG
GAAGATGCTATTAAATGCATCACACGAGCAATAACTGACCAGAATACTTACCTTTTCGAC
CAACTGCTCACCTTAAAACCTGTCAAGTTTCTTGAAGGAGAGCTCATTTATGATCTTTTA
AACATCTTTGTCAGTGGAAATGTGAATGACTATAAAGAATTTTATGCCGCCAACAAAAAG
TTCTTTCAAAATTTAGGGTTATCACATGAAAGCAATTTGAGAAAGATCCAACTTCTTACA
TTAGTTGACATTGTTGGTGTTTCTCGTGAAATTGGTTTTGATGAAATTGTAAACAAACTT
GGATTGTCACATTCTGAAGTTGAGGATTTCATAATTGACGCAATTCAAAGCAAACTCATA
CGAGCAAGGATAGATCACGTCAACCGCAAAATACTTGTCAGTCAAGCATGTCAACGT

InterProScan

ProSiteProfiles	PCI_dom (IPR000717) - T[136-298] 19.513
Pfam	PCI_dom (IPR000717) - T[197-294] 2.1E-15
SMART	PCI_dom (IPR000717) - T[227-297] 0.0031
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[234-294] 7.89E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EIF3M_HUMAN	45.105 %	270	2.14E-89