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TRANSCRIPT CARD

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  1. Clone 'cslv004j03' > 
  2. Clone 'cscl039o17' > 
  3. Region 'REG00000248' > 
  4. Region 'REG00000439' > 
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S157.g01225.02.t

Possible name(s)

HES1; HES4; HES6

Gene model

Phfumi.CG.MTP2014.S157.g01225

Location

S157 [45,537 / 47,077]

Sequences

Amino acid sequence

Length: 360

>Phfumi.CG.MTP2014.S157.g01225.02.p
MPPERRMTEAEMRRKTNKPIMEKKRRERINRCLEDLKTIVLGAVSEDSRPNKLEKADILE
MTVRYLKSVQSGKPVPIDLLPANTSQTSEGEQQSGGYAQCVKDISQFLSKNEGVSVKLRT
QLLGHLADKCNPVKESTYCTEKRQRASSYQMPGLTHFPQRLMTELDLRSQSRMDESANFS
TAASFAHFASANISTDSTQHSVSLSSPLGRHTNSRFSPVPVSPISNPSTTSPSACRQIPS
PSLSSSSHRSEDSIGDVASTSPDSLLQCTGGVDSSLFSPITSHIDRKPHRFLEGVHLHYV
SSDSGHWSSGSNPPSPIGRPLNKAKELATSKMRVNQRDTKSEIKLEATQQSAGMWRPWGI

Nucleotide sequence

Length: 1,083

>Phfumi.CG.MTP2014.S157.g01225.02.t
ATGCCGCCAGAGAGAAGAATGACTGAAGCAGAAATGCGTCGCAAGACTAATAAACCTATC
ATGGAAAAGAAGCGACGCGAAAGAATCAACAGATGCTTGGAAGACCTAAAAACCATCGTG
TTGGGAGCCGTATCTGAAGACTCACGGCCAAACAAACTTGAGAAAGCTGACATCCTTGAA
ATGACGGTGCGTTACCTGAAAAGTGTTCAGTCTGGAAAGCCTGTGCCTATTGACCTTCTG
CCTGCCAATACATCACAAACAAGCGAAGGCGAACAACAGTCAGGGGGATACGCACAATGT
GTCAAGGATATTTCCCAGTTCCTCAGCAAAAACGAAGGAGTATCGGTCAAACTGAGGACC
CAGCTGCTCGGACATTTGGCGGACAAGTGCAACCCCGTCAAGGAATCAACGTACTGCACC
GAGAAACGCCAACGGGCCTCGTCATACCAAATGCCAGGCTTGACACATTTTCCTCAACGT
CTTATGACCGAGCTTGATTTGCGGAGCCAAAGTCGCATGGACGAAAGCGCGAACTTTTCG
ACAGCAGCAAGCTTTGCGCATTTCGCGAGTGCCAACATCAGCACAGACAGCACGCAGCAC
AGCGTGTCACTCAGCAGTCCGCTCGGCCGACACACCAACAGCCGTTTCTCGCCCGTTCCA
GTGTCACCCATTTCCAATCCCTCCACCACGTCGCCTAGCGCGTGCCGTCAAATCCCCTCA
CCCAGCCTTTCGTCGTCTTCGCATCGCAGTGAGGACTCGATCGGCGACGTTGCCTCAACT
TCCCCCGACTCACTGCTGCAGTGCACTGGGGGTGTCGACAGTTCGCTGTTTTCCCCCATC
ACTTCGCATATCGACCGCAAACCCCATCGCTTTCTGGAGGGAGTCCATTTGCATTACGTA
AGCAGTGATTCGGGCCATTGGTCATCTGGGTCCAACCCTCCTTCGCCGATCGGGCGCCCC
CTCAACAAAGCTAAAGAACTTGCAACATCGAAGATGCGTGTTAACCAGAGAGACACGAAG
TCCGAGATTAAACTAGAAGCCACGCAGCAGTCAGCTGGCATGTGGAGGCCATGGGGCATA
TAA

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[6-72] 3.6E-24
ProSiteProfiles
bHLH_dom (IPR011598) - T[13-69] 15.434
CDD
bHLH_dom (IPR011598) - T[13-70] 4.90462E-15
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[14-71] 2.36E-13
Pfam
bHLH_dom (IPR011598) - T[14-70] 9.7E-17
SMART
bHLH_dom (IPR011598) - T[19-75] 1.1E-11
SMART
Orange_dom (IPR003650) - T[91-135] 0.0013
ProSiteProfiles
Orange_dom (IPR003650) - T[93-126] 10.475
Pfam
Orange_dom (IPR003650) - T[96-130] 3.1E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HES4_HUMAN 44.348 % 99.8 1.35E-24
HES1_HUMAN 43.066 % 109 9.46E-28