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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S218...'
  2. Transcript 'KH2012:KH.L119.19.v1...'
  3. Transcript 'KH2012:KH.L119.19.v1...'
  4. Transcript 'KH2012:KH.L119.19.v1...'
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S15060.g09280.01.t

Possible name(s)

Phfumi.CG.MTP2014.S15060.g09280

Location

S15060 [1,029 / 3,639]

Sequences

Amino acid sequence

Length: 869

>Phfumi.CG.MTP2014.S15060.g09280.01.p
MNWNWQLQYLETVDNVFGKTRTADTEINQKYYALNACEFLLAKTLRKHCDHEGKEIDTEV
SADILHQMGLVYQNRTPDKIHLIKAAALMNAAVCRKSSNAHLIEKDLQKLHSHVFNLAGS
VHKDFDLQQESKNCSKGLQIMRAKVDAMVNNLLGPEPAEFGNFDEFKEEKSNSLEEIQEW
ITAEYVALMNEVMCFCVEAMGTPPCEYALVAMGSLAKLEITPYSDFENCIILERGTQMLP
SYEEIRDYFSWVGVLFQLILVGIGETIVRFLSIPTLNDPRNRTEDWFYDIYTPCGVCPDG
LDQKASKNSVSKDSKLIKSVDEMLEYVDPDSRAAEDPLLAEMLTRTRFVSGHITTLNDFK
KEVLKLEQKQSSYKYKISQLEESLHDFGTTKKLLYIHDKREIDMKRIVFRSTTLFVSALA
RCHGVLDASSFKVINTLRERRIISSDFARDLRFAVAVACAVRLSVYCKWRSHKDRIKSRP
ETDLTGSNLREIMGEKTSVVYFQTACELQSMGFQLISQKRVETKDVELEKKLSTVTVFYS
LSLYDKALEESSRFGWLELSEDSTTPPKCLHVVGECYFGKKFYNIAVVYLLAAQKGFEAI
SKPPHLDLIDCILKLMRCFDVMGRHAQSTEYLALAMHYQKYLNVDDKVPFSRNSLLNFSP
HIDKYQETHYAVAAKLHFIGKWLLATTAFQSPKALSCFKRELALRERLTANRASNARVAK
CHVCIGQCLVLQNKHKEALEEFKTAKSIFDKCKGNFDRQFCRLNQLLGAVYLALGDQESS
LFHYEEESRLIFESDREISLKKVADCFFNIGLLHSYKLRSELALLYLNTALDILDTLVPS
EKCAVMVRACKVSIDQMKIIARTQALIHR

Nucleotide sequence

Length: 2,610

>Phfumi.CG.MTP2014.S15060.g09280.01.t
ATGAATTGGAACTGGCAATTGCAATACCTGGAGACTGTCGACAACGTTTTCGGGAAAACC
CGAACTGCTGACACAGAAATTAATCAAAAATATTATGCTTTAAATGCTTGTGAGTTTCTG
CTTGCGAAAACTCTTCGGAAACATTGTGACCACGAAGGTAAAGAAATTGACACAGAGGTT
AGTGCAGATATTTTGCACCAAATGGGATTAGTATATCAAAACAGAACTCCAGACAAGATC
CATTTGATTAAGGCTGCAGCACTTATGAACGCAGCTGTATGTCGAAAATCATCCAATGCT
CATCTTATTGAAAAAGACTTGCAAAAACTGCATAGTCATGTTTTTAATCTAGCTGGCAGT
GTGCACAAAGATTTTGATTTACAGCAGGAATCTAAAAACTGCAGTAAAGGTCTGCAAATC
ATGCGTGCAAAAGTTGATGCCATGGTAAACAATTTGCTAGGTCCAGAGCCAGCAGAATTC
GGCAATTTTGATGAATTTAAGGAAGAAAAATCTAACAGTTTGGAGGAAATTCAAGAATGG
ATAACTGCGGAGTATGTGGCACTGATGAATGAGGTTATGTGTTTTTGCGTTGAAGCAATG
GGTACACCTCCATGCGAGTATGCGCTTGTAGCAATGGGATCTCTTGCAAAACTAGAAATT
ACACCTTATTCCGATTTTGAGAACTGTATTATACTAGAACGTGGTACTCAAATGTTGCCA
TCATACGAAGAGATACGTGATTATTTTAGCTGGGTTGGAGTACTCTTTCAACTGATTTTG
GTAGGCATTGGTGAAACCATCGTACGTTTCCTATCAATTCCTACTCTCAATGATCCCCGA
AATAGAACCGAGGATTGGTTTTATGACATTTACACGCCTTGTGGAGTGTGTCCTGATGGA
CTTGACCAGAAAGCAAGCAAAAATTCGGTTTCAAAAGATTCAAAGCTTATCAAGTCTGTT
GATGAGATGCTTGAATATGTAGATCCTGATTCCAGAGCTGCTGAGGACCCATTACTTGCA
GAAATGTTAACACGAACAAGGTTTGTTTCTGGACACATTACGACACTAAACGACTTTAAA
AAAGAAGTTTTAAAGCTTGAACAAAAGCAAAGCAGTTACAAATACAAAATTAGTCAGCTT
GAAGAAAGTTTACACGACTTTGGGACAACAAAAAAGCTTTTGTACATACATGACAAGCGG
GAAATCGACATGAAACGTATCGTATTTCGCAGTACGACTTTATTTGTCTCGGCTTTAGCC
AGATGTCACGGCGTCCTCGACGCATCGTCTTTTAAAGTGATCAACACCCTTCGAGAAAGG
CGTATTATTTCCAGCGATTTTGCACGAGATCTTCGTTTTGCTGTTGCTGTGGCCTGTGCT
GTCCGTCTGAGTGTTTATTGCAAGTGGAGGAGCCACAAAGACCGCATAAAATCCCGACCG
GAGACAGATTTAACTGGTTCAAATTTGCGAGAAATAATGGGCGAAAAGACATCAGTGGTG
TATTTTCAAACTGCCTGTGAGCTACAGAGCATGGGATTTCAGCTGATTTCACAAAAGCGC
GTGGAAACAAAAGATGTCGAACTTGAGAAGAAACTAAGCACGGTGACCGTGTTTTACTCA
CTATCGTTGTACGACAAAGCTTTAGAAGAGTCGAGCCGTTTCGGCTGGCTAGAGTTGAGC
GAGGATTCCACCACACCGCCAAAATGCCTCCACGTAGTTGGAGAATGCTACTTCGGCAAG
AAATTCTACAATATAGCTGTTGTTTATTTACTTGCCGCACAAAAAGGCTTCGAAGCTATA
AGCAAACCACCACATTTAGATCTAATCGACTGCATTTTGAAACTGATGAGATGTTTTGAT
GTAATGGGACGCCACGCACAAAGTACTGAATACCTGGCGCTGGCCATGCACTATCAGAAG
TATTTAAATGTTGATGACAAGGTTCCGTTTTCAAGAAATTCTCTTCTAAATTTTAGTCCC
CATATAGACAAATACCAAGAGACCCACTATGCCGTGGCTGCGAAGCTGCACTTCATTGGA
AAGTGGTTGTTGGCAACCACAGCATTTCAAAGCCCGAAAGCATTATCCTGCTTTAAAAGG
GAACTTGCGTTGCGGGAAAGGCTAACCGCAAATAGAGCAAGTAACGCAAGAGTGGCAAAG
TGTCACGTGTGTATCGGCCAGTGCCTCGTGCTCCAAAACAAACACAAGGAAGCGTTGGAA
GAGTTTAAAACCGCGAAAAGTATCTTTGACAAATGTAAAGGTAACTTTGACCGACAGTTT
TGTCGACTAAACCAATTGTTGGGTGCGGTATATCTTGCCTTAGGTGACCAAGAAAGTTCC
TTGTTTCATTATGAGGAAGAATCCAGACTTATATTTGAGTCCGATCGTGAAATAAGCCTA
AAAAAGGTTGCCGATTGCTTTTTCAACATCGGTTTGCTGCACAGTTACAAGCTTCGCTCG
GAACTTGCTTTGTTGTATCTCAACACCGCTTTGGATATCCTTGACACTTTAGTTCCCTCA
GAAAAATGTGCAGTGATGGTTAGAGCTTGTAAAGTTAGTATAGATCAAATGAAAATTATC
GCAAGGACGCAGGCGTTGATCCATCGATAA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[171-249] 1.6E-8
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[531-843] 7.0E-17
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[690-786] 8.06E-10
SMART
TPR_repeat (IPR019734) - T[719-752] 0.92 - T[804-837] 18.0

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value