Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1481.g03775.01.t

Possible name(s)

CEP170B; SLC4A1AP; SNIP1

Location

S1481 [17,008 / 19,821]

Sequences

Amino acid sequence

Length: 353

>Phfumi.CG.MTP2014.S1481.g03775.01.p
MPKSDKHKNRKRSSSGSSERSPSPVKKKKKRSRSREEIKKKHNKYDKQRNRSPESDRDSS
PEIPRHKKQRPKSPEPKSKWERSSETEKVRIKKEPSRRHHSPVRRDSEYTHDRRIKREED
FDRRQEELRSRRYHGRHPEGGGRDRHQQERRTNDQQRLEERQRRDETGETKEAFENKDEE
PVEKEKPNLGLSGALTEDKNSFRGVVIKYREPPEARVPKKKWRLYPFKGTEALKVLHLHR
QSAYLIGRLRRIADIPVDHPSCSKQHAVFQFRMVEQEVDGVLRRRVKPYIIDLGAANGTY
VNNEQIEAQRYVELKEQDVLKFGFSSREYVLLHAKSDTADVASGSEEEEEEED

Nucleotide sequence

Length: 1,062

>Phfumi.CG.MTP2014.S1481.g03775.01.t
ATGCCAAAATCGGATAAGCATAAAAACCGTAAGCGAAGCTCATCTGGTTCGTCAGAACGT
TCACCTTCTCCGGTAAAGAAGAAGAAGAAAAGAAGCAGAAGCAGAGAAGAAATAAAGAAA
AAACACAACAAGTATGATAAACAAAGGAATCGTAGCCCAGAATCAGATAGAGATTCAAGT
CCCGAGATTCCTAGACACAAAAAACAACGACCGAAATCGCCTGAACCAAAATCAAAATGG
GAACGCTCATCAGAAACTGAGAAAGTTCGCATCAAGAAAGAACCTTCCCGTCGCCACCAT
TCTCCTGTAAGAAGAGATTCTGAATACACACATGATAGGAGAATCAAAAGAGAGGAGGAC
TTCGATCGTCGACAGGAGGAATTACGAAGTAGAAGATACCATGGTCGACATCCAGAAGGA
GGTGGGAGAGATCGTCATCAACAAGAGAGGAGGACAAATGATCAACAGAGATTGGAGGAG
AGGCAACGGAGGGATGAAACTGGGGAAACAAAGGAGGCATTTGAAAACAAAGATGAGGAA
CCGGTGGAAAAAGAGAAACCAAACTTGGGTCTATCTGGTGCCCTAACTGAAGATAAAAAC
AGCTTTCGCGGAGTTGTCATCAAATATCGCGAGCCTCCTGAAGCCAGAGTACCAAAGAAA
AAGTGGAGACTTTATCCATTCAAGGGCACGGAGGCATTAAAGGTTCTACATCTGCATCGA
CAAAGTGCTTATTTGATTGGTCGATTACGCCGTATAGCAGACATTCCAGTTGACCACCCA
TCCTGCTCAAAACAACACGCCGTTTTCCAGTTTAGAATGGTAGAACAAGAGGTGGACGGT
GTTTTACGTCGCAGAGTCAAACCATACATTATCGATTTGGGGGCTGCAAACGGGACATAC
GTCAACAACGAGCAAATTGAAGCACAAAGGTACGTTGAACTGAAAGAACAGGACGTCCTT
AAGTTTGGCTTCAGCTCCCGTGAATATGTTCTGCTGCATGCTAAAAGCGACACTGCTGAT
GTTGCTAGCGGAAGTGAAGAAGAAGAAGAAGAGGAAGATTGA

InterProScan

SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[212-333] 2.49E-24
CDD
FHA_dom (IPR000253) - T[221-323] 1.11427E-23
SMART
FHA_dom (IPR000253) - T[243-306] 4.3E-11
ProSiteProfiles
FHA_dom (IPR000253) - T[244-306] 10.59
Pfam
FHA_dom (IPR000253) - T[244-323] 2.1E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNIP1_HUMAN 54.545 % 278 4.28E-91