Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S14611.g09227.01.t

Possible name(s)

ATG10; ATG3

Gene model

Phfumi.CG.MTP2014.S14611.g09227

Location

S14611 [1,041 / 4,067]

Sequences

Amino acid sequence

Length: 264

>Phfumi.CG.MTP2014.S14611.g09227.01.p
HHCPTWQWHAGEKSKLKPYLPSDKQYLLTRNVPCHKRCKQMEYNDEHEAIIEDGGDGGWV
DTHHNVDFDKLQGEVKEMTLKEKGAESSGGDYDEDNDDGDDDDDEALDMEDYAEMLQSED
SATVDLVAVKKAQASALSNDDGGILQTRTYDLHITYDKYYQTPRLWLSGYDEDRKPLTMN
QMYDDISQDHVNKTVTVEPHPHLPPPNMCSVHPCKHAEVMKKIMQTVEDGGGNLEVQMYL
LVFLKFVQAVIPTIEYDYTRHFSL

Nucleotide sequence

Length: 795

>Phfumi.CG.MTP2014.S14611.g09227.01.t
CATCATTGTCCGACTTGGCAGTGGCATGCAGGAGAGAAATCCAAACTAAAGCCTTATCTT
CCAAGTGACAAGCAGTATTTATTAACCCGAAACGTGCCATGCCACAAAAGATGCAAACAG
ATGGAGTACAATGATGAACATGAAGCGATTATTGAAGATGGAGGTGATGGTGGTTGGGTA
GACACACACCATAATGTGGACTTTGATAAACTACAGGGTGAAGTGAAGGAAATGACCTTG
AAAGAGAAAGGTGCTGAGTCATCAGGTGGTGATTATGATGAAGACAATGATGATGGTGAC
GATGATGATGATGAAGCACTTGATATGGAGGACTATGCAGAAATGCTGCAATCGGAAGAC
AGTGCTACTGTGGACTTGGTGGCTGTGAAGAAGGCACAGGCTTCAGCATTGTCCAATGAC
GATGGTGGCATTCTCCAGACGAGAACATATGACTTACACATAACATACGATAAGTACTAC
CAAACGCCAAGACTGTGGCTGTCTGGCTATGATGAGGATCGTAAACCCCTGACAATGAAC
CAAATGTACGACGACATCAGTCAGGATCACGTCAACAAAACAGTCACGGTGGAGCCCCAC
CCACATCTTCCGCCCCCCAACATGTGTTCTGTGCACCCCTGCAAACATGCCGAGGTAATG
AAGAAAATCATGCAGACAGTTGAGGATGGAGGTGGTAATCTTGAGGTGCAAATGTACTTG
CTTGTATTTCTAAAGTTCGTCCAGGCTGTTATCCCAACTATTGAATATGACTACACCCGT
CATTTTTCTTTGTGA

InterProScan

Pfam	Autophagy-rel_prot_3_N (IPR007134) - T[1-97] 6.4E-29
Pfam	Autophagy-rel_prot_3 (IPR007135) - T[154-215] 4.9E-19
Pfam	Autophagy-rel_prot_3_C (IPR019461) - T[236-259] 3.1E-14

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATG3_HUMAN	63.941 %	332	3.76E-115