Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1445.g03723.01.t

Possible name(s)

INO80B; INO80B-WBP1; NSA2

Gene model

Phfumi.CG.MTP2014.S1445.g03723

Location

S1445 [10,635 / 14,141]

Sequences

Amino acid sequence

Length: 462

>Phfumi.CG.MTP2014.S1445.g03723.01.p
DANTLKRSNRQKKRKKFFDDDGTESTKTVLKVKLKTPKLKEKQINVIDNEEEKPPTPENV
EEPLDDPVDDEEKWLQALEKGELDDNGDLPKAKDPMLMTARQRAKMDRVSTPSLIDEIPA
TPKEELSEEAKKKRDEKNRRRKLQAVKRAEENKKQTIERLVQSNKLNKDKGTANGKQGGI
AMIKYVNTAEATTMSFPEGFNYPLMAKIIPAPPPARTCAVCGERRKRKKEGRAAHIRAKR
AKKLIGLKAKLYNKQRHHEKIQMKKTIKMHEKRNTKQKDDEKTPDGAVPAYLLDREGQSR
AKVLSNMIKQKRKEKAGKWEVPLPKVRAQSEAEVFRVITTGKRKKKAWKRMCTKVCYVPD
NFTRKPPKYERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSTMYTSLGVITKGT
VIEVNVSELGLVTQGGKVIWGKFAQVTNNPENDGCINAVLLV

Nucleotide sequence

Length: 1,389

>Phfumi.CG.MTP2014.S1445.g03723.01.t
GATGCTAACACATTGAAAAGGTCCAATCGTCAAAAAAAGAGAAAGAAATTCTTTGATGAT
GATGGAACAGAATCCACCAAGACAGTTCTAAAAGTGAAGCTGAAAACCCCAAAACTGAAG
GAAAAACAGATTAATGTGATTGACAATGAGGAGGAAAAACCACCAACTCCTGAGAATGTG
GAAGAACCCCTTGATGATCCTGTAGATGATGAAGAAAAATGGCTTCAAGCGCTTGAGAAG
GGTGAGTTAGACGACAATGGTGACCTGCCCAAAGCAAAAGATCCCATGCTCATGACAGCT
AGACAGAGGGCAAAGATGGATAGAGTAAGTACACCAAGCCTGATTGATGAGATTCCTGCA
ACACCCAAGGAAGAGTTAAGTGAAGAAGCTAAAAAGAAAAGAGATGAGAAAAACAGGAGG
AGGAAGCTGCAGGCCGTAAAGCGAGCGGAAGAAAACAAGAAACAAACGATAGAACGCCTG
GTGCAGAGCAATAAACTAAACAAAGATAAAGGAACAGCCAACGGAAAGCAGGGTGGCATC
GCAATGATCAAATACGTGAACACGGCTGAAGCGACGACCATGTCTTTTCCAGAGGGTTTT
AATTACCCGCTTATGGCGAAAATAATTCCAGCCCCGCCTCCTGCAAGGACATGTGCCGTA
TGCGGGGAACGGAGGAAACGAAAAAAGGAAGGTCGTGCTGCGCATATTCGGGCTAAGAGA
GCCAAAAAATTAATTGGACTCAAAGCTAAGCTGTACAACAAACAAAGACATCATGAAAAG
ATTCAAATGAAAAAGACAATTAAGATGCATGAAAAACGCAACACAAAACAAAAAGATGAT
GAGAAAACACCAGATGGAGCTGTTCCAGCTTATCTTCTTGATCGTGAAGGACAGAGCCGA
GCCAAAGTTTTGTCAAATATGATCAAACAGAAGAGGAAGGAAAAGGCTGGAAAGTGGGAG
GTCCCTCTGCCCAAAGTGCGAGCTCAAAGTGAAGCTGAGGTATTTCGAGTTATTACAACA
GGAAAAAGAAAAAAAAAAGCATGGAAGAGAATGTGCACAAAAGTGTGCTATGTACCTGAC
AATTTTACAAGAAAACCACCAAAATACGAAAGGTTTATACGGCCTATGGCGCTGCGTTTC
AAAAAAGCACATGTGACACATCCAGAACTGAAAGCTACATTTTGCTTGCCAATTATTGGG
GTGAAAAAGAATCCGTCATCTACGATGTATACCTCACTTGGAGTGATTACAAAAGGAACT
GTTATTGAAGTTAATGTGAGCGAACTTGGACTTGTCACTCAAGGTGGAAAAGTAATATGG
GGAAAATTTGCTCAAGTTACGAACAATCCGGAAAATGATGGATGCATTAACGCAGTTTTG
TTGGTCTAA

InterProScan

Pfam
INO80B_C (IPR006880) - T[129-198] 7.2E-7
SMART
INO80B_C (IPR006880) - T[129-200] 5.6E-12
Pfam
Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[235-461] 6.4E-49

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NSA2_HUMAN 89.076 % 439 1.22E-154
IN80B_HUMAN 41.958 % 85.5 3.7E-18