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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1370.g03635.01.t

Possible name(s)

SQSTM1

Gene model

Phfumi.CG.MTP2014.S1370.g03635

Location

S1370 [11,260 / 14,107]

Sequences

Amino acid sequence

Length: 211

>Phfumi.CG.MTP2014.S1370.g03635.01.p
MSLQFKAFLYEDKPGRPKEIRRFAVDQDVSSSYDYLRRKVATVFPNLGEDNFALQWRDSD
GDIIWFNSDEELIQALGQLNTDVFRLYIKEKKQEDKSQESAGCGSSSQQQAQGQFAADSY
LKHMGNAVADFLQPFGIDVDINVEHKGKQEKCTGSQKPETSGESHEQDTTQEKSRDSSDE
TDWTFLKKDGDKSGDEAKGTTSGEDKMETDE

Nucleotide sequence

Length: 633

>Phfumi.CG.MTP2014.S1370.g03635.01.t
ATGTCACTTCAATTTAAAGCATTTTTGTATGAAGACAAGCCAGGTCGCCCAAAAGAAATT
CGCCGATTTGCTGTTGATCAGGATGTTTCCAGCAGCTATGACTATTTAAGAAGAAAGGTT
GCAACAGTATTCCCAAATCTTGGTGAGGACAACTTTGCCTTACAATGGCGTGACAGTGAT
GGTGATATCATTTGGTTTAACTCAGATGAAGAACTTATTCAAGCACTCGGGCAACTAAAT
ACTGATGTATTCCGCCTGTACATAAAGGAAAAGAAGCAAGAAGACAAGTCACAGGAGTCT
GCAGGATGTGGTTCGTCCAGCCAACAACAGGCACAAGGACAGTTTGCAGCTGACAGCTAT
CTGAAGCACATGGGAAATGCAGTAGCTGATTTTCTTCAGCCATTCGGCATTGATGTAGAC
ATTAATGTGGAACACAAGGGCAAACAAGAGAAATGCACTGGAAGCCAAAAACCGGAAACA
AGTGGTGAAAGCCATGAACAAGACACAACACAAGAGAAATCAAGGGATAGCTCCGATGAA
ACTGATTGGACATTTTTGAAGAAAGATGGAGACAAATCAGGAGATGAAGCAAAAGGCACA
ACATCTGGGGAAGACAAAATGGAAACTGATGAA

InterProScan

ProSiteProfiles
PB1_dom (IPR000270) - T[2-91] 18.243
SMART
PB1_dom (IPR000270) - T[2-91] 1.0E-6
Pfam
PB1_dom (IPR000270) - T[19-90] 4.4E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value