- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1364.g03624.01.t
Possible name(s)
BMP2; BMP4; GDF10
Gene model
Location
S1364 [2,972 / 11,558]
Amino acid sequence
Length: 618
>Phfumi.CG.MTP2014.S1364.g03624.01.p
MSHRRCAFIYLAVLCLLLAICVSQGSAKRSRKSGKGRRGNRPAGSENNRSEDAASRNNSS
AVTSPELDFAVSAEEEEVQRGSNRKPGRARSQKTKPQKRGKKRKGRKGKRGRKRSQKGVM
RDIMRKLFGFDHMVEGKGKLNPGIPIDPVVSLQPPEFMLELYQTYKEDSSMMRLHFGSHG
NTVRSFFSVAGNIPSKPRGMGKPITIASIDPDDPNSPTSSTSTSRQMRVYAFNVTTIPKS
ESVVSAELRLDGLKSSQGGRNHGNRSQWVVYVGSYRIEPIEGRVRKLIYRRTSNLVSLRQ
TTSSLWQDRELATAVKTSRRQGHVLIAKYFNEGDATLNRIARDASSSNSLDFAESPLPSN
FVVADTERSKRDRGIDIPASGTPVLVVYCNDSNTVASQPEASDGESLLNSTIKMTSHNRT
KRSSRRLENPERASGQPGNDLPDDVTDSQVTGELDNMQTEPPSSEIMSTLKPSKQRKNKG
RGGRKRKKCKKSKKKKGRRKGCKPKKSHVELNSSSLACGRKSMEVDFEEIGWSSWILAPH
SFSAYYCSGTCTLANSKHTNPTNHAIIQINLMATNPEVPAPCCVPDQLEAISVLYLDAND
MVVLKTFNDMVVNSCRCR
Nucleotide sequence
Length: 1,857
>Phfumi.CG.MTP2014.S1364.g03624.01.t
ATGTCACACAGGCGCTGCGCTTTTATCTACCTTGCTGTGCTCTGTTTACTCTTGGCGATC
TGCGTGTCTCAAGGATCGGCAAAACGTTCACGAAAAAGCGGGAAAGGGCGACGCGGAAAC
CGGCCGGCGGGGAGCGAAAATAACCGAAGTGAGGATGCCGCGAGTCGGAACAACTCAAGC
GCAGTTACGTCGCCAGAACTCGACTTCGCAGTTTCCGCGGAAGAGGAGGAAGTTCAACGT
GGAAGTAACAGAAAGCCCGGACGCGCGCGATCGCAGAAAACAAAGCCCCAAAAACGCGGG
AAGAAGCGCAAAGGGCGGAAAGGCAAACGCGGTCGCAAAAGGTCGCAGAAAGGAGTGATG
CGCGACATTATGCGCAAACTGTTCGGATTCGATCACATGGTTGAAGGAAAAGGAAAATTA
AACCCGGGCATCCCAATTGATCCCGTAGTTTCTCTCCAACCTCCGGAGTTCATGCTCGAG
CTCTATCAAACGTACAAAGAAGACTCGAGCATGATGCGGCTGCATTTCGGTTCCCATGGG
AACACTGTAAGAAGCTTTTTCTCAGTAGCAGGAAACATTCCTAGCAAACCACGTGGTATG
GGTAAGCCAATCACAATCGCCTCGATCGACCCAGATGACCCAAACAGCCCTACGTCATCA
ACGTCTACGTCACGACAGATGCGCGTCTACGCCTTCAACGTCACAACAATACCGAAAAGC
GAGTCAGTTGTGTCGGCAGAACTTCGACTGGACGGGCTAAAATCGTCGCAAGGTGGCCGA
AACCATGGCAACCGATCGCAGTGGGTTGTCTACGTGGGTTCGTACCGCATCGAACCAATA
GAAGGAAGAGTACGAAAACTGATCTACAGACGCACCAGCAACCTGGTCAGTCTACGACAG
ACCACGTCATCACTTTGGCAAGATCGCGAGTTAGCGACCGCGGTGAAAACGAGCAGACGT
CAAGGTCACGTGCTCATTGCAAAGTACTTCAATGAGGGGGACGCGACCCTCAACCGCATC
GCGCGGGATGCTTCGTCATCGAACAGCCTCGATTTTGCTGAGTCACCGCTGCCGTCCAAC
TTCGTTGTAGCGGACACGGAGAGGTCGAAACGGGACAGGGGCATCGACATCCCGGCCTCT
GGGACCCCAGTGCTTGTGGTTTATTGTAATGACTCCAACACAGTCGCCAGTCAGCCCGAA
GCTTCTGATGGCGAAAGTCTGTTAAATTCGACGATCAAGATGACGTCACACAACAGGACA
AAGCGTTCATCGAGAAGACTTGAAAATCCCGAACGAGCGAGCGGTCAGCCAGGAAATGAC
CTCCCTGATGATGTCACGGATAGCCAGGTCACAGGTGAACTGGACAACATGCAAACGGAA
CCTCCGAGCAGTGAGATCATGTCGACGCTGAAACCGAGCAAGCAGCGAAAGAACAAAGGA
CGTGGGGGAAGAAAACGCAAGAAGTGCAAGAAGTCGAAGAAGAAGAAGGGCAGGAGGAAG
GGATGCAAGCCAAAGAAGTCCCACGTGGAGCTAAACTCCTCATCCCTGGCCTGCGGGAGG
AAGTCAATGGAGGTGGACTTTGAGGAGATCGGTTGGTCCTCCTGGATCCTTGCCCCGCAT
TCGTTTTCGGCTTACTACTGCTCGGGAACTTGCACTCTCGCCAACAGCAAGCATACGAAT
CCGACAAACCACGCGATCATCCAGATTAACCTAATGGCGACAAATCCCGAAGTCCCTGCA
CCTTGCTGTGTGCCAGACCAGCTAGAAGCAATCAGCGTTCTGTACTTGGACGCAAACGAC
ATGGTGGTGCTGAAAACATTCAACGACATGGTCGTCAACTCGTGTAGATGCCGGTGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[15-618] 2.9E-60 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[153-278] 1.2E-6 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[498-618] 34.891 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[506-618] 1.1E-35 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[513-618] 9.46E-32 |
| Pfam |
TGF-b_C (IPR001839) - T[517-617] 2.3E-29 |
| SMART |
TGF-b_C (IPR001839) - T[518-618] 6.4E-45 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[536-551] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GDF10_HUMAN | 26.218 % | 140 | 9.37E-36 |
| BMP2_HUMAN | 42.553 % | 128 | 4.13E-32 |
| BMP4_HUMAN | 41.429 % | 126 | 1.75E-31 |