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- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1341.g03601.03.t
Possible name(s)
GSX1; GSX2; HOXD3
Gene model
Location
S1341 [8,804 / 10,657]
Amino acid sequence
Length: 359
>Phfumi.CG.MTP2014.S1341.g03601.03.p
MLKGVIHVRKMQLTKVNNGSEEAPVPHSFSIESLIKSDYVPQAKIKTEQIELVSPPPFEH
CRSPEQLTPTSNDRRVPHQIEEAKYISPTSHRDERRIRWSPSPTAEVNGSSSDDGEPPQA
NRASINHHTYPTHNQSCHQQQFRPSQCQQQFQQRAAAAYATLSALGMHGGMAGNPPATGL
ANFTDKLSQQWQLYQRGMERHQHPATAQPAIHGLQYPQIYGTSSSTPAFPLAYSDLGPSV
HHQDALQKRLSPIMRESSPRQSYTSVDAGSGLNRCEQDQQDGGDKKRMRTAFTGLQLIEL
EREFHSDMYLTRLRRIRIAHLLNLSEKQVKIWFQNRRVKKKKGDKPDCQSSPHAESEQA
Nucleotide sequence
Length: 1,080
>Phfumi.CG.MTP2014.S1341.g03601.03.t
ATGTTGAAAGGCGTGATACACGTACGCAAAATGCAACTCACCAAAGTCAACAACGGATCA
GAGGAGGCACCTGTACCTCATTCCTTCTCGATTGAATCTCTGATCAAAAGTGATTACGTA
CCTCAGGCCAAAATTAAAACCGAACAAATTGAACTTGTGTCTCCACCTCCATTCGAGCAC
TGCCGAAGCCCGGAACAACTGACGCCAACTTCAAACGACCGTCGCGTTCCGCATCAAATC
GAAGAGGCAAAATACATTTCACCAACTTCTCATCGCGACGAGAGAAGAATTCGCTGGTCT
CCCAGTCCAACGGCGGAAGTCAATGGATCGAGTAGTGACGATGGGGAACCCCCTCAAGCT
AACCGCGCAAGCATTAATCACCATACGTACCCAACTCACAACCAGAGTTGCCACCAACAA
CAGTTTCGACCTTCCCAGTGTCAGCAGCAGTTTCAACAAAGGGCAGCAGCAGCTTATGCT
ACGCTCTCAGCACTGGGAATGCACGGTGGAATGGCCGGAAACCCGCCAGCTACCGGCTTA
GCAAATTTCACCGATAAACTGTCGCAGCAATGGCAGTTGTACCAGCGTGGCATGGAACGA
CACCAGCACCCTGCCACTGCACAACCAGCTATCCACGGCTTACAATATCCTCAAATTTAT
GGCACATCATCATCAACACCCGCCTTTCCACTTGCTTACAGTGACTTGGGTCCTTCTGTC
CACCACCAGGATGCTTTGCAAAAGAGACTGTCGCCCATTATGCGTGAATCGTCGCCTCGT
CAGAGCTACACATCAGTCGATGCTGGAAGCGGTTTGAACCGGTGCGAGCAGGATCAACAG
GATGGAGGAGATAAAAAGCGAATGCGGACTGCTTTCACAGGACTTCAGCTGATCGAGCTT
GAACGGGAATTTCACTCCGACATGTACCTGACGAGACTGCGCAGGATCCGCATTGCACAC
CTTCTTAATTTGAGCGAAAAACAGGTGAAAATCTGGTTTCAGAATCGCCGAGTCAAGAAG
AAAAAAGGCGACAAACCGGATTGCCAGTCATCGCCTCACGCTGAATCCGAACAAGCCTAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[274-344] 6.42E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[283-343] 20.471 |
| SMART |
Homeobox_dom (IPR001356) - T[285-347] 1.3E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[286-342] 3.12694E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[286-342] 4.6E-20 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[307-318] 1.8E-5 - T[322-332] 1.8E-5 - T[332-341] 1.8E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[318-341] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD3_HUMAN | 46.429 % | 101 | 1.06E-23 |
| GSX1_HUMAN | 80 % | 100 | 1.55E-24 |
| GSX2_HUMAN | 77.419 % | 100 | 4.18E-24 |