- Clone 'cien133699' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S2...' >
- Transcript 'Phfumi.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S1341.g03601.02.t
Possible name(s)
GSX1; GSX2; HOXD3
Gene model
Location
S1341 [8,804 / 10,636]
Amino acid sequence
Length: 352
>Phfumi.CG.MTP2014.S1341.g03601.02.p
VRKMQLTKVNNGSEEAPVPHSFSIESLIKSDYVPQAKIKTEQIELVSPPPFEHCRSPEQL
TPTSNDRRVPHQIEEAKYISPTSHRDERRIRWSPSPTAEVNGSSSDDGEPPQANRASINH
HTYPTHNQSCHQQQFRPSQCQQQFQQRAAAAYATLSALGMHGGMAGNPPATGLANFTDKL
SQQWQLYQRGMERHQHPATAQPAIHGLQYPQIYGTSSSTPAFPLAYSDLGPSVHHQDALQ
KRLSPIMRESSPRQSYTSVDAGSGLNRCEQDQQDGGDKKRMRTAFTGLQLIELEREFHSD
MYLTRLRRIRIAHLLNLSEKQVKIWFQNRRVKKKKGDKPDCQSSPHAESEQA
Nucleotide sequence
Length: 1,059
>Phfumi.CG.MTP2014.S1341.g03601.02.t
GTACGCAAAATGCAACTCACCAAAGTCAACAACGGATCAGAGGAGGCACCTGTACCTCAT
TCCTTCTCGATTGAATCTCTGATCAAAAGTGATTACGTACCTCAGGCCAAAATTAAAACC
GAACAAATTGAACTTGTGTCTCCACCTCCATTCGAGCACTGCCGAAGCCCGGAACAACTG
ACGCCAACTTCAAACGACCGTCGCGTTCCGCATCAAATCGAAGAGGCAAAATACATTTCA
CCAACTTCTCATCGCGACGAGAGAAGAATTCGCTGGTCTCCCAGTCCAACGGCGGAAGTC
AATGGATCGAGTAGTGACGATGGGGAACCCCCTCAAGCTAACCGCGCAAGCATTAATCAC
CATACGTACCCAACTCACAACCAGAGTTGCCACCAACAACAGTTTCGACCTTCCCAGTGT
CAGCAGCAGTTTCAACAAAGGGCAGCAGCAGCTTATGCTACGCTCTCAGCACTGGGAATG
CACGGTGGAATGGCCGGAAACCCGCCAGCTACCGGCTTAGCAAATTTCACCGATAAACTG
TCGCAGCAATGGCAGTTGTACCAGCGTGGCATGGAACGACACCAGCACCCTGCCACTGCA
CAACCAGCTATCCACGGCTTACAATATCCTCAAATTTATGGCACATCATCATCAACACCC
GCCTTTCCACTTGCTTACAGTGACTTGGGTCCTTCTGTCCACCACCAGGATGCTTTGCAA
AAGAGACTGTCGCCCATTATGCGTGAATCGTCGCCTCGTCAGAGCTACACATCAGTCGAT
GCTGGAAGCGGTTTGAACCGGTGCGAGCAGGATCAACAGGATGGAGGAGATAAAAAGCGA
ATGCGGACTGCTTTCACAGGACTTCAGCTGATCGAGCTTGAACGGGAATTTCACTCCGAC
ATGTACCTGACGAGACTGCGCAGGATCCGCATTGCACACCTTCTTAATTTGAGCGAAAAA
CAGGTGAAAATCTGGTTTCAGAATCGCCGAGTCAAGAAGAAAAAAGGCGACAAACCGGAT
TGCCAGTCATCGCCTCACGCTGAATCCGAACAAGCCTAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[267-337] 6.42E-24 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[276-336] 20.471 |
| SMART |
Homeobox_dom (IPR001356) - T[278-340] 1.3E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[279-335] 3.95954E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[279-335] 4.5E-20 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[300-311] 1.7E-5 - T[315-325] 1.7E-5 - T[325-334] 1.7E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[311-334] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXD3_HUMAN | 46.429 % | 100 | 1.2E-23 |
| GSX1_HUMAN | 80 % | 100 | 1.55E-24 |
| GSX2_HUMAN | 77.419 % | 100 | 3.6E-24 |