Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cien48140' > 
  2. Clone 'cima8105738' > 
  3. Transcript 'Moocci.CG.ELv1_2.S31...' > 
  4. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  5. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S133.g01100.01.t

Possible name(s)

TRIM2; TRIM3; TRIM71

Gene model

Phfumi.CG.MTP2014.S133.g01100

Location

S133 [13,075 / 14,222]

Sequences

Amino acid sequence

Length: 274

>Phfumi.CG.MTP2014.S133.g01100.01.p
MWKLSRQIKRPGSDVGEFDYARGLRVSRETGNVVIADVNNKRIQILDENGKYLFHWSVEV
NGMKLCPLDVHRLTSDLVVGAIEGQAAIWKCPDVTDYNGVAAKLVRVFGNEDFVFPRSVV
SNEREQLFVTDVGKHLVTSHDSEGNVIRSTGGLGSDDSQFNWPYYTCLDDRGRLVVSDSH
NRCVKMFDRDLNFISSFGHGHFTCACGVAFTPADGGSFVVGDYDTESILKFSADGKFMGF
LDEKMGAPCSAVAMGNNKEIFAAFQDGFKVYAKS

Nucleotide sequence

Length: 825

>Phfumi.CG.MTP2014.S133.g01100.01.t
ATGTGGAAGCTTTCCCGCCAAATCAAAAGACCTGGAAGTGACGTAGGAGAATTTGATTAC
GCAAGAGGTTTAAGAGTGTCACGTGAAACTGGAAATGTCGTCATCGCTGACGTCAACAAC
AAACGCATACAGATTTTGGACGAGAATGGAAAATATTTGTTCCATTGGTCGGTTGAGGTG
AATGGAATGAAACTTTGTCCGCTCGATGTCCACAGGTTGACCTCTGACCTTGTGGTCGGG
GCGATTGAAGGTCAAGCAGCGATTTGGAAGTGCCCTGACGTCACAGATTACAATGGAGTC
GCTGCAAAACTTGTTCGAGTTTTCGGAAACGAGGATTTTGTTTTCCCCCGAAGTGTTGTA
TCCAATGAGCGCGAGCAATTGTTCGTCACCGATGTTGGAAAACATCTGGTTACGTCACAT
GACTCCGAGGGAAACGTCATCAGATCAACCGGTGGTCTGGGAAGCGATGACAGTCAGTTC
AACTGGCCCTACTACACTTGTTTGGACGACAGGGGACGTTTGGTGGTGTCTGATTCCCAC
AACAGATGTGTGAAAATGTTCGACCGGGATCTCAACTTCATATCATCGTTCGGACACGGT
CACTTCACATGTGCTTGCGGTGTTGCATTCACACCTGCTGACGGAGGGAGTTTTGTGGTC
GGCGACTATGACACGGAATCAATCCTGAAGTTTTCAGCTGATGGGAAATTTATGGGTTTT
CTCGATGAGAAGATGGGAGCACCCTGTTCAGCCGTTGCTATGGGCAACAACAAAGAAATA
TTCGCAGCGTTCCAGGATGGATTTAAAGTTTACGCCAAGTCATGA

InterProScan

Gene3D
6-blade_b-propeller_TolB-like (IPR011042) - T[3-273] 3.0E-41
ProSiteProfiles
NHL_repeat_subgr (IPR013017) - T[5-49] 10.177 - T[105-143] 5.551 - T[151-190] 10.671 - T[191-234] 8.615
Pfam
NHL_repeat (IPR001258) - T[18-45] 5.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRIM3_HUMAN 24.28 % 77.8 4.15E-16