Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 638

>Phfumi.CG.MTP2014.S12.g00249.01.p
MSSERRHSMVSLRNAIALWLLAAIVKLTSGKEAILLDTRTALSDLGWTMSPGSEWQEMTS
PDAQGNERRMNMVCQITKPNQDNWLRTDYIAAEGARRVYVEVKFTIRSCEDVENVATCKE
TFNLYYYETDRDEATSTFPPWREGAYTKVDTIAADQRFSPGSDDSNFETRHIGPITKNGL
YLAFQDTGACVALMYIRVYYKYCEESISNLAVFGRTTAGSEMTSLVDTTGTCVKNAVATN
GIQPTLYCNGEGDWMVPSGTCTCDSGYQVNTDKTKCSACSPGYFKSSVSNSDCQRCPAFS
STRGRASTFCRCTYGYFRPPSDGVDKACTMPASKPRNLYSVVNKTSVHLHWERPQNDGGR
SELWYSIQCFRCQLGFVACAPCSNQVNFDPAPQRLMQTEIAIKSLSSYAFYKFQVISMNA
VTNIAASSGHRINNFAEVTVQTNQAAPSAVLDVRVTEVNPDFFYVAWSPPATTNGQIVDY
EVSVIPLVDGYPDPSRGEYINRTTALRIKVEPLMPSFRYIIKVRARTEEGYGPFSAPTRA
RTSSRPTEPTDDEAGGSESGFDIVQLIVAVVGGILLVLAVVVVIFICRRRTKAAKTEKSD
EEKLPMFNRSSVSFNGSFPSQHKTYIDPTTYEDPQRAV

Nucleotide sequence

Length: 1,914

>Phfumi.CG.MTP2014.S12.g00249.01.t
ATGTCATCCGAGAGAAGACATTCTATGGTCAGTCTACGGAATGCGATTGCTTTGTGGCTG
CTGGCGGCGATTGTGAAGTTAACAAGCGGAAAAGAAGCTATCCTGTTGGACACGAGAACA
GCGCTATCCGACTTGGGTTGGACGATGTCACCAGGATCAGAGTGGCAAGAGATGACCAGC
CCTGATGCTCAAGGCAATGAACGACGAATGAACATGGTTTGTCAAATCACCAAACCCAAC
CAGGACAACTGGCTGAGGACGGATTACATCGCAGCTGAAGGAGCACGTCGCGTATACGTT
GAAGTAAAGTTCACGATTCGATCCTGCGAGGACGTTGAAAACGTAGCAACATGTAAAGAG
ACGTTTAACTTGTATTATTACGAAACTGATCGTGATGAAGCGACCTCGACCTTCCCTCCG
TGGCGGGAAGGAGCTTACACCAAGGTCGACACAATCGCAGCCGACCAAAGATTTTCACCC
GGGTCAGACGACAGCAACTTCGAAACTCGTCACATCGGACCTATTACCAAGAACGGGCTA
TATTTAGCCTTTCAGGATACTGGGGCTTGTGTGGCGCTCATGTACATTCGGGTTTACTAT
AAATATTGCGAGGAGTCGATCAGCAACCTTGCCGTCTTCGGAAGAACCACTGCCGGATCC
GAAATGACGTCACTTGTTGACACGACTGGAACCTGCGTGAAAAATGCCGTTGCGACAAAC
GGAATCCAGCCAACACTTTACTGCAATGGGGAGGGAGACTGGATGGTCCCCTCTGGAACT
TGCACTTGCGACTCCGGTTACCAAGTTAACACCGATAAGACCAAGTGTTCAGCTTGTTCC
CCTGGATACTTCAAATCGAGCGTGTCAAACAGCGATTGTCAACGCTGCCCTGCTTTCAGC
TCGACCCGTGGACGAGCGTCGACTTTCTGCCGCTGCACGTACGGTTATTTTCGGCCTCCC
TCTGACGGCGTGGATAAAGCTTGTACGATGCCTGCTTCGAAACCGCGCAACCTATATTCG
GTTGTTAATAAAACATCGGTTCATCTTCATTGGGAGAGACCGCAGAACGACGGCGGAAGG
AGCGAGCTGTGGTACAGCATTCAATGCTTCCGTTGCCAGTTGGGATTTGTGGCTTGTGCT
CCTTGTTCCAATCAAGTCAATTTTGATCCCGCTCCACAACGACTCATGCAAACGGAAATC
GCAATCAAGTCCCTTAGCTCTTACGCTTTTTACAAATTCCAGGTTATATCGATGAACGCG
GTAACAAACATCGCAGCTTCTTCCGGACATCGCATCAACAATTTTGCTGAAGTCACTGTA
CAAACTAATCAAGCAGCGCCCTCGGCTGTTCTTGACGTTCGAGTGACGGAAGTCAACCCA
GACTTCTTCTACGTGGCTTGGAGTCCACCAGCTACAACCAACGGCCAGATTGTCGATTAT
GAAGTCTCGGTAATTCCCCTTGTGGACGGATACCCCGACCCTTCCAGAGGCGAATACATA
AATCGCACAACCGCCTTGCGTATCAAAGTGGAACCTCTCATGCCATCTTTTCGCTACATC
ATCAAGGTTAGAGCCAGAACAGAGGAGGGCTATGGACCATTTAGCGCCCCAACACGTGCG
AGAACCAGCAGCCGGCCAACTGAACCAACAGATGACGAAGCAGGTGGATCCGAATCTGGA
TTTGACATCGTACAACTCATCGTTGCTGTGGTTGGCGGAATTTTGCTTGTTCTCGCCGTT
GTCGTCGTTATCTTTATTTGCCGAAGACGCACAAAGGCGGCTAAAACAGAGAAATCGGAT
GAAGAGAAGTTACCGATGTTTAACAGAAGCTCAGTGAGTTTCAACGGTTCCTTTCCGTCC
CAGCACAAGACCTACATTGACCCAACCACGTACGAGGACCCGCAAAGGGCGGTG

InterProScan

Gene3D	Galactose-bd-like_sf (IPR008979) - T[26-205] 3.4E-67
ProSiteProfiles	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[32-208] 58.824
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[32-201] 5.95E-62
SMART	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[32-203] 6.1E-80
Pfam	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[34-203] 5.6E-66
SMART	Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[266-312] 0.0022
Pfam	Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[266-308] 1.6E-7
ProSiteProfiles	FN3_dom (IPR003961) - T[331-445] 9.626 - T[449-545] 18.367
SMART	FN3_dom (IPR003961) - T[332-424] 1.2 - T[447-532] 5.3E-9
Gene3D	Ig-like_fold (IPR013783) - T[332-434] 8.6E-20 - T[435-547] 3.4E-19
CDD	FN3_dom (IPR003961) - T[333-420] 3.8061E-5 - T[447-542] 7.99237E-15
Pfam	FN3_dom (IPR003961) - T[333-422] 1.5E-6 - T[448-535] 7.6E-11
SUPERFAMILY	FN3_sf (IPR036116) - T[336-543] 1.51E-31
Pfam	Eph_TM (IPR027936) - T[567-638] 4.2E-15