Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S1262.g03490.02.t

Possible name(s)

PAK1IP1; SCAP; TAF5L

Gene model

Phfumi.CG.MTP2014.S1262.g03490

Location

S1262 [20,804 / 22,048]

Sequences

Amino acid sequence

Length: 251

>Phfumi.CG.MTP2014.S1262.g03490.02.p
MLKIVVGCYEQIVMGYTVKSGSDGESLESCPYFTDHSQKGCIKCAAAGGRYVATGSTDES
ICLYDMQKGIELGTLQGHSGAVTQLLFPDDAHLMSCSEDGSICIWEAGPEGNLLKTLHGK
HKGHKGAVTSIATHPSGKLSMSVSLKDGSLRTWNLMTGRSVYIKNMKKFEPEFIRWSSDG
KYYIVASLHQFQVFELKTAKCVHESSIQEQILALEFLPNNTDHMFLIGDGNGNLQIINVL
NGKCRKKFQVL

Nucleotide sequence

Length: 753

>Phfumi.CG.MTP2014.S1262.g03490.02.t
ATGCTGAAAATAGTGGTTGGGTGTTACGAACAGATTGTTATGGGCTATACCGTCAAGTCA
GGCAGCGACGGAGAAAGTTTAGAATCGTGCCCATACTTTACAGATCATTCACAAAAGGGC
TGCATTAAATGTGCAGCGGCTGGGGGAAGATATGTTGCTACAGGGTCAACCGATGAATCA
ATTTGCCTTTATGACATGCAAAAGGGCATAGAGCTGGGTACACTACAGGGTCATTCTGGG
GCAGTCACTCAGCTTCTGTTTCCTGATGATGCGCATTTGATGAGTTGCAGTGAAGATGGA
AGTATTTGTATATGGGAGGCTGGCCCAGAGGGAAATTTACTAAAAACACTGCATGGTAAA
CACAAGGGGCACAAGGGGGCAGTAACGTCAATTGCAACACATCCATCTGGCAAACTAAGC
ATGTCAGTTTCACTAAAAGATGGATCATTAAGAACATGGAATCTTATGACTGGGCGATCT
GTTTACATTAAGAATATGAAAAAATTTGAACCTGAGTTTATAAGATGGTCCTCTGATGGA
AAATACTACATTGTTGCTTCACTACACCAATTTCAAGTTTTTGAACTTAAAACTGCAAAG
TGCGTTCATGAATCCTCCATTCAAGAACAAATATTAGCTTTGGAGTTTCTGCCCAATAAC
ACTGACCACATGTTTTTGATTGGAGATGGAAATGGAAATCTTCAAATCATAAATGTTCTC
AATGGAAAATGCAGAAAAAAGTTTCAGGTGTTG

InterProScan

Gene3D	WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[3-110] 2.0E-18 - T[111-251] 3.7E-17
SUPERFAMILY	WD40_repeat_dom_sf (IPR036322) - T[4-249] 1.03E-40
SMART	WD40_repeat (IPR001680) - T[28-65] 4.2 - T[68-106] 2.8E-6 - T[110-154] 0.0013 - T[198-238] 6.3
ProSiteProfiles	WD40_repeat_dom (IPR017986) - T[33-163] 18.853
Pfam	WD40_repeat (IPR001680) - T[72-105] 5.5E-6 - T[114-154] 5.3E-4
ProSiteProfiles	WD40_repeat (IPR001680) - T[75-106] 10.709 - T[121-163] 10.041
ProSitePatterns	WD40_repeat_CS (IPR019775) - T[93-107] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PK1IP_HUMAN	40 %	159	1.12E-46