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TRANSCRIPT CARD

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  1. Region 'REG00001360' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S12555.g08978.02.t

Possible name(s)

FOXC1; FOXC2; FOXL1

Gene model

Phfumi.CG.MTP2014.S12555.g08978

Location

S12555 [3,342 / 5,028]

Sequences

Amino acid sequence

Length: 369

>Phfumi.CG.MTP2014.S12555.g08978.02.p
VTLNGIYQWIMDRFPFYRENKQGWQNSIRHNLSLNECFVKIPRDDKKPGKGSFWTMDPEA
YNMFENGSYLRRRKRFKKTQDEPKEKREKLDGKSNNYQSDDSKAETKCEGPKSKKSKSDD
DTKPDVIPSNMTTAPPVAKTEPAESTQAFASSNPIQNLNYSEPLQTSSAASDQLMVNEKP
DLVTQIPRPDSSGSSVVSGLQHDVDYQNRRNGDVIEASMYNLQQYQNNNAFYSSDVSANP
SPTRNDVNGVTSYRHHELASYTGTPSPPNDVARCWYQDSESMTSSSVTLHAPQAVPSSTS
PVQYPDQSFYHLRATSDVYAAPGQSPVISSSSDEIPDYASSYAHPSYYGSTYPFSHQARP
FASHEYTKY

Nucleotide sequence

Length: 1,110

>Phfumi.CG.MTP2014.S12555.g08978.02.t
GTGACTCTGAATGGAATTTATCAATGGATAATGGATCGATTTCCATTCTACAGAGAAAAT
AAACAAGGGTGGCAAAATTCCATTCGTCACAATCTATCTCTAAACGAATGCTTCGTAAAA
ATACCCAGGGATGACAAAAAGCCAGGAAAGGGAAGTTTTTGGACGATGGACCCAGAAGCT
TACAACATGTTTGAGAACGGAAGCTACTTAAGGAGAAGAAAAAGGTTTAAGAAGACCCAG
GACGAACCCAAGGAGAAGCGAGAAAAGCTTGATGGAAAATCAAACAACTACCAATCCGAC
GACTCAAAAGCTGAGACCAAATGCGAGGGCCCCAAATCTAAGAAATCAAAAAGTGATGAC
GACACAAAACCTGACGTCATTCCATCTAACATGACTACAGCGCCACCTGTGGCTAAAACT
GAGCCTGCTGAGTCGACGCAGGCCTTCGCAAGCAGCAATCCAATCCAAAACCTAAACTAC
AGCGAACCCCTGCAAACTTCTTCCGCCGCCTCAGACCAATTGATGGTCAACGAGAAGCCG
GACCTCGTGACCCAAATCCCGCGCCCTGATTCGTCAGGATCGAGCGTGGTATCCGGTCTT
CAACACGATGTCGATTACCAGAATCGTCGCAACGGTGACGTCATAGAAGCGTCGATGTAT
AACTTGCAGCAATATCAAAACAATAACGCATTTTATTCGAGTGACGTCAGCGCGAACCCG
TCGCCGACGCGAAATGACGTCAACGGTGTGACGTCATACCGCCATCACGAGCTCGCTTCC
TACACGGGCACTCCGTCACCGCCTAACGACGTCGCACGCTGCTGGTACCAGGACAGCGAG
TCGATGACGTCATCAAGCGTGACATTGCATGCGCCACAAGCTGTTCCGAGTTCTACGTCA
CCGGTGCAGTATCCGGATCAGTCGTTCTACCATCTGCGAGCGACTTCTGATGTTTACGCC
GCCCCTGGCCAGAGCCCGGTCATATCAAGTTCAAGCGATGAAATTCCCGATTACGCATCG
AGCTACGCGCATCCTTCTTACTATGGCTCGACATATCCATTCTCACACCAGGCCAGGCCT
TTTGCATCCCACGAATACACCAAGTACTGA

InterProScan

ProSiteProfiles
Fork_head_dom (IPR001766) - T[1-74] 32.4
Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-80] 2.1E-35
PRINTS
Fork_head_dom (IPR001766) - T[1-18] 4.6E-15 - T[24-41] 4.6E-15
CDD
Fork_head_dom (IPR001766) - T[1-57] 2.15112E-36
SMART
Fork_head_dom (IPR001766) - T[1-68] 3.4E-34
Pfam
Fork_head_dom (IPR001766) - T[2-65] 2.0E-27
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[2-74] 9.98E-30
ProSitePatterns
TF_fork_head_CS_2 (IPR030456) - T[24-30] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FOXC2_HUMAN 83.146 % 164 5.37E-46
FOXC1_HUMAN 82.022 % 159 4.47E-44
FOXL1_HUMAN 63.736 % 142 3.31E-39