Title	Journal	Author(s)	Aniseed Data	PMID/DOI
Diverse ETS transcription factors mediate FGF signaling in the Ciona anterior neural plate.	Dev. Biol. 2015; 399; 2:218-25	Gainous T, Wagner E, Levine M
Nodal regulates neural tube formation in the Ciona intestinalis embryo.	Dev. Genes Evol. 2007; 217; 8:593-601	Mita K, Fujiwara S
FGF signaling establishes the anterior border of the Ciona neural tube.	Development 2012; 139; 13:2351-9	Wagner E, Levine M
A time delay gene circuit is required for palp formation in the ascidian embryo.	Development 2013; 140; 23:4703-8	Ikeda T, Matsuoka T, Satou Y
The pre-vertebrate origins of neurogenic placodes.	Nature 2015; 524; 7566:462-5	Abitua P, Gainous T, Kaczmarczyk A, Winchell C, Hudson C, Kamata K, Nakagawa M, Tsuda M, Kusakabe T, Levine M
Gene expression profiles in Ciona intestinalis cleavage-stage embryos.	Mech. Dev. 2002; 112; 1-2:115-27	Fujiwara S, Maeda Y, Shin-I T, Kohara Y, Takatori N, Satou Y, Satoh N
Ci-Tbx6b and Ci-Tbx6c are key mediators of the maternal effect gene Ci-macho1 in muscle cell differentiation in Ciona intestinalis embryos.	Dev. Biol. 2005; 282; 2:535-49	Yagi K, Takatori N, Satou Y, Satoh N
Morpholino-based gene knockdown screen of novel genes with developmental function in Ciona intestinalis.	Development 2003; 130; 26:6485-95	Yamada L, Shoguchi E, Wada S, Kobayashi K, Mochizuki Y, Satou Y, Satoh N
A zinc finger transcription factor, ZicL, is a direct activator of Brachyury in the notochord specification of Ciona intestinalis.	Development 2004; 131; 6:1279-88	Yagi K, Satou Y, Satoh N
Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks.	Development 2004; 131; 16:4047-58	Imai K, Hino K, Yagi K, Satoh N, Satou Y
Identification of downstream genes of the ascidian muscle determinant gene Ci-macho1.	Dev. Biol. 2004; 274; 2:478-89	Yagi K, Satoh N, Satou Y
Transcriptional regulation of ZicL in the Ciona intestinalis embryo.	Dev. Genes Evol. 2006; 216; 10:597-605	Anno C, Satou A, Fujiwara S
Regulatory blueprint for a chordate embryo.	Science 2006; 312; 5777:1183-7	Imai K, Levine M, Satoh N, Satou Y
Differential temporal control of Foxa.a and Zic-r.b specifies brain versus notochord fate in the ascidian embryo.	Development 2017; 144; 1:38-43	Ikeda T, Satou Y
Co-expression of Foxa.a, Foxd and Fgf9/16/20 defines a transient mesendoderm regulatory state in ascidian embryos.	Elife 2016; 5; :	Hudson C, Sirour C, Yasuo H
Antagonism between β-catenin and Gata.a sequentially segregates the germ layers of ascidian embryos.	Development 2016; 143; 22:4167-4172	Imai K, Hudson C, Oda-Ishii I, Yasuo H, Satou Y
Gene regulatory networks underlying the compartmentalization of the Ciona central nervous system.	Development 2009; 136; 2:285-93	Imai K, Stolfi A, Levine M, Satou Y
A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites.	Curr. Biol. 2010; 20; 9:792-802	Khoueiry P, Rothbächer U, Ohtsuka Y, Daian F, Frangulian E, Roure A, Dubchak I, Lemaire P